| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1656 |
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| Symbol | |
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| ID | 4928217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1599609 |
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| End bp | 1603004 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640167166 |
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| Product | DNA polymerase II large subunit |
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| Protein accession | YP_001098167 |
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| Protein GI | 134046682 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
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| TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCATG TTTCAGCTTC AAAAGGAATG ACTGAATATT TCAAAAATAT TTTAGATAAT
GTAAAAAACC TTTACGATCT TGCAGAGGGA TGCAGGAAAT CTGGATACGA TGTAACAGAC
CACGTTGAGA TACCTCTGGC AAAAGATATG GCAGATAGGG TAGAGGGAAT TGTCGGTCCA
AAAAATGTTG CAGAACGTAT CAGGGAACTA GTATCGGACT TAGGAAAAGA ACCTGCGGCA
CTTGAAATTG CAAAAGAAAT AGTTGAAGGA AAATTTGGTG AGTTCGGGCG AGAAGTTGGA
GCAGAACAAG CCGTAAGAAC AGCGTTAGCA GTTATCACGG AAGGAATCGT GGCAGCACCT
CTAGAAGGTA TCGCACACGT TAAAATTAAG AAAAACAACG ATGGTGGTGA ATATCTTGCA
ATCTACTTTG CAGGACCAAT TAGGAGTGCA GGAGGAACTG CTCAGGCACT TGCCGTACTT
GTTGGGGATT ACGTTAGAAA AAACATGGGA TTAGATAAAT TTAAGCCAAC AGACGATGAA
GTTGAAAGAT ACGGGGAAGA AGTGGATTTA TACCAGTCCG AGGTTACTAC ATTCCAATAC
CAGCCAAAAG CTGAAGAAAT CCGGGTGGCC GTTAGAAATA TATCTGTAGA AATTACTGGG
GAGGCAACAG ACGACGTTGA AGTTAGTGGA CACAGGGATT TACCTAGAAT AGAAACAAAC
CAGATTAGGG GCGGTGCTCT TTTAGCACTA GTTGAGGGTG TTCTTCTAAA AGCACCTAAA
ATTTTAAGAC ACGTTGATAA ATTAGGCATT GAAGGATGGG ACTGGTTAAA AGAGTTAAAA
AGCAAAAAAG AAGAATTAGT CGAAGAAATT GAAGAAGAAA ATGATGAATT TAACTACGAA
GAGGAAGAAG ACCTATCACA ATACGAAGAT TATGAAGTGG AGGCTGTAAC CAAGTTTATT
GGGGAAGTTA TTGCAGGAAG GCCTGTATTT TCACACCCCT CTAAAAAAGG CGGGTTCAGA
CTTAGATATG GAAGAAGTAG AAATACAGGA TTTGCTACAG ATGGTTTTCA CCCTGCAATA
ATGTATTTGG TTGACGACTT CATGGCTGTA GGAACGCAGT TAAAAACCGA AAGACCTGGA
AAAGCAACAT GTGTAGTTCC TGTTGATAGT ATCGAAGGTC CAATAGTTAA ATTAAACGAT
AAAAGTGTAC TTAAAATAGA TACGGTCGAA AAAGCAAAAC AATATCGGGA TGACGTTGAA
GAAATTCTCT TTTTAGGGGA TATTTTGGTA AACTATGGGG ATTTCTTGGA AAACAACCAC
ACGATACTTC CAAGCAGTTG GTGTACCGAG TGGTATGAAA AAATCTTAAA ATCAGAAAAT
TTAGAATATA CAAAAGAATT TATAGAAAAT CCCGATCAAA AAGAAGTAGT AAAATATGCT
AAACTTACAA ATACGCCACT TCATCCAAAA TATACATATT TCTGGCACGA TATTTCTAAA
GATAATATCA ATGTTCTTAG AAACTGGATT ATTGGTGGGA GATACAATGA AAGCAATGAT
TCTTGGGGAT TGACATATGA TCCAGAAGAC CCAGAAATTT CAATTGTAAA ACGGTATTTG
GAACTTATCG GATGTCCGCA CACAGTAGTG GATGAAAAAG TAGAAATTTT CGAATATTAT
CCGTTATTAT ATTCATTAGG ATATGATTTT GACGAGAAAC AAGATGTTGT AGAAGATATC
GAAGAAAAAC TTCAAAATAC GAAAAATAAC ATGCACTTTA TAAATACAAT AGCGCCATTT
GAAATTCGAA GAAATGCTTA CATATACGTT GGTGCAAGAA TGGGTAGGCC AGAAAAGGCA
GCTTCCAGAA AGATGAAACC ACCGGTAAAT GGTCTTTTCC CAATTGGAAA TGCCGGGGCA
CTTGTAAGGC TTATAAACAA AGCTGTTGAC GAGGGAAAAA CTGACGAAAT TGAAATTTCA
AATGTAAAAT GCAGCTGTGG AAATGTAAGT TTGTACAGAA CATGTCCATT TTGCGGAAGT
TCTGTTGAAC CAAGTGGACC TTCGCGAATA AAACTTCCAA TAAAAGAATA TTGGTACAAA
GCGCTCGAAA ATTTGAAGAT AAACAAAGCT GGCGATGTAA AATGTATTAA GGGGATGACT
TCAAAGGATA AAATAATCGA ACCCTTAGAA AAAGCAATAT TGAGGGCAAA AAACGATATA
TTTGTATTTA AAGACGGCAC TACAAGGTTT GACTGTACAG ATGTTCCGGT AACTCATTTC
AGGCCTGTAG AAATACACGG GGATATCGAA AAACTGAAAT CTCTGGGATA TTTGAAAGAT
ATTCACGGAA ATCCGCTTGA AAATGAAAAT CAGGTACTCG AATTAAATGT TCAAGATGTC
ATAGTTCCTG AATCCTGCAT GGATTACTTT TTAAATGTTT CAAAATTTAT AGATGATCTT
TTGGAAAAAT ACTACAAAAA AGATAGATTT TACAACGTGA ATAAAAGAGA AGAGCTTGTA
GGGCATTTAA TAATTGGAAT GGCGCCACAC ACCTCCGCAG GAATGGTTGG AAGGATCATT
GGATACAGCA AAGCAAACGT AGGGTACGCT CATCCTTACT TCCATGCTTC AAAAAGAAGA
AACTGTGATG GGGATGAAGA TGCATTTTTC CTACTTTTAG ATGCATTCAT GAATTTTTCA
AAGAGATTCT TGCCAGATAA AAGAGGGGGC CAGATGGATG CGCCACTGGT TCTTACAACC
ATTTTGGATC CGAAAGAGGT GGATGGTGAG GTCCATAACA TGGATTCGAT GTGGGAATAC
CCTCTTGAAT TCTACGAAAA ATCTCTGGAA GGAATTGCTC CAAAAGAAAT CAAAAAAATA
ATGGAGACTG TTGAAGACAG GCTTGACAAA GAGAGTCAGT ACGAAGGAAT CGGATATACG
CATGAAACTT TGAAAATAGA TGAAGGGCCG CTTGTTTGTG CATACAAAAC ATTGGGTTCC
ATGATGGAAA AGACCTCAGC TCAACTCGCG GTTGCAAAAA AGATTAGGGC AACTGATGAA
AGGGATGTGG CGGAAAAGGT TATCCAATCG CATTTTGTTC CTGATTTAAT TGGAAATTTA
AGGGCTTTTT CAAGGCAAGG AGTACGGTGT AAATGCGGTG CAAAATACCG AAGGATGCCT
CTAAAAGGGA TTTGTAGAAA ATGTGGAAGC AGACTGATTT TAACAGTTTC AAAAGGGGCT
GTTGAAAAGT ACATGGACGT TTCACAAACA ATGGCTGAAA AGTACAATGC AAGCGACTAC
ATAAAACAAA GACTCGAAAT CATAAGGTCT GGAATTGACA GTTTGTTTGT AAACGACAAG
AGAAAGCAGG TTAAAATTGA AGATTTCTTT AAATGA
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| Protein sequence | MLHVSASKGM TEYFKNILDN VKNLYDLAEG CRKSGYDVTD HVEIPLAKDM ADRVEGIVGP
KNVAERIREL VSDLGKEPAA LEIAKEIVEG KFGEFGREVG AEQAVRTALA VITEGIVAAP
LEGIAHVKIK KNNDGGEYLA IYFAGPIRSA GGTAQALAVL VGDYVRKNMG LDKFKPTDDE
VERYGEEVDL YQSEVTTFQY QPKAEEIRVA VRNISVEITG EATDDVEVSG HRDLPRIETN
QIRGGALLAL VEGVLLKAPK ILRHVDKLGI EGWDWLKELK SKKEELVEEI EEENDEFNYE
EEEDLSQYED YEVEAVTKFI GEVIAGRPVF SHPSKKGGFR LRYGRSRNTG FATDGFHPAI
MYLVDDFMAV GTQLKTERPG KATCVVPVDS IEGPIVKLND KSVLKIDTVE KAKQYRDDVE
EILFLGDILV NYGDFLENNH TILPSSWCTE WYEKILKSEN LEYTKEFIEN PDQKEVVKYA
KLTNTPLHPK YTYFWHDISK DNINVLRNWI IGGRYNESND SWGLTYDPED PEISIVKRYL
ELIGCPHTVV DEKVEIFEYY PLLYSLGYDF DEKQDVVEDI EEKLQNTKNN MHFINTIAPF
EIRRNAYIYV GARMGRPEKA ASRKMKPPVN GLFPIGNAGA LVRLINKAVD EGKTDEIEIS
NVKCSCGNVS LYRTCPFCGS SVEPSGPSRI KLPIKEYWYK ALENLKINKA GDVKCIKGMT
SKDKIIEPLE KAILRAKNDI FVFKDGTTRF DCTDVPVTHF RPVEIHGDIE KLKSLGYLKD
IHGNPLENEN QVLELNVQDV IVPESCMDYF LNVSKFIDDL LEKYYKKDRF YNVNKREELV
GHLIIGMAPH TSAGMVGRII GYSKANVGYA HPYFHASKRR NCDGDEDAFF LLLDAFMNFS
KRFLPDKRGG QMDAPLVLTT ILDPKEVDGE VHNMDSMWEY PLEFYEKSLE GIAPKEIKKI
METVEDRLDK ESQYEGIGYT HETLKIDEGP LVCAYKTLGS MMEKTSAQLA VAKKIRATDE
RDVAEKVIQS HFVPDLIGNL RAFSRQGVRC KCGAKYRRMP LKGICRKCGS RLILTVSKGA
VEKYMDVSQT MAEKYNASDY IKQRLEIIRS GIDSLFVNDK RKQVKIEDFF K
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