| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1582 |
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| Symbol | |
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| ID | 4928487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1526089 |
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| End bp | 1527501 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640167086 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_001098093 |
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| Protein GI | 134046608 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.640324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAG ATTATTCTGT TTTAAAAAAA TACCCATTGT GCGACAGATG TTTTGGAAGA
CTTTATGGAA AACTTATTAG GTCGAGTAAT TTTGAGAGGG GACACGCCTT AAAACTTGCA
AAAGCAATCG AACTTGAAGA AGATTTAAGA ACTACCCTTG AAAAAATGAA TGAATCATCT
GAAACTTCTG AAGTGAATTC AACAGATCTT GAAAAATTAG AAGAAATCAA AGAACTGATG
TATGCACTCC ATAAAACAGG TACTTCAGGA ATAAAACTTG ATTTAATTCA TGATATCGAG
AAATACGAAA CAAAATTTAA AGATGAAGCT GAATACGAAA AAACAGAAGA GTGTGAAGAC
CTCTGTCCTT GGTGTAAGGG AATTTTTGAA CCTGAAAATA TTGAAAAAGT TGCTGAAAAT
GTAGTTGATG CACTTTCTGA ATACGAGTTC GACAGTTTTT TGATTGGTAC AAAACTTCCA
AAAAGGTTTA AAGAACTTGA AAAAGAGATT GAAACTCCAT TTATGGAAAG TATAAGGCAG
GAATTTGGAA GAGAACTTGG AAAAGTTGTA GTTCCGTTAG TTAAAAGGCG AGTTGACAAG
GAAAATCCTG ATATCGTTGT AATGGTAAAC CCGTACAACC AGAAAGTTAC GCTTCAGGTA
AACCCCGTAT TTATCAAAGG AAGATATAAA AAACTCGTTA GAGGAATCCC GCAAAGCCAC
TGGCACTGTA GGGCGTGCAG AGGAAAAGGC TGTGAAAAAT GTAATTTCAC AGGTAAACAG
TACATGACTT CGGTTGAAGA AATCATTGCA GAACCGTTTA TGGAAGTTAT GAAAGGAAGT
TCAGAAGCAC TTCACGGTGC AGGAAGAGAA GATATCGACG TTAGAATGCT TGGAAATGGA
AGGCCGTTTG TAATTGAAAT AAAAGAGCCA AAAGTAAGAA AAGTTAATTT AGAAGAACTT
GCTTCAAAAG TTAATGAATC TGAGACTGTT GAAATAATAA ATGTTGAATA CGGGGTTAAA
AAGGACGTTC ACTTCTTCAA AAATGAACCG CATAAAAAAA CATATCTTGC CCATGTTGAG
TGTGAAGAAA AAGTATCGAA CGAAGAAGTG GCTGAATTAG TAAATGAACT CGAAGATTTG
ACGATTGATC AAAGAACGCC CGATAGAGTC TCACATCGAA GGGCTGACCT CGTGCGTGTA
CGTAAGGTAT ATAAAGCTTG GCCGCATATG ATTGATGATT ATAACTTTGA ACTTAAGATA
TTCTGCGATG GCGGATTATA CATCAAAGAA CTTATTAGCG GCGATGAAGG GAGAACTACT
CCTTCCGTTT CGGAATTGCT AAACAATAAA TGCATCTGTA AATTTTTAGA TGTTTTGGAT
GTTCACGACT ATGATGATGT AGAAAATATC TAA
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| Protein sequence | MNIDYSVLKK YPLCDRCFGR LYGKLIRSSN FERGHALKLA KAIELEEDLR TTLEKMNESS
ETSEVNSTDL EKLEEIKELM YALHKTGTSG IKLDLIHDIE KYETKFKDEA EYEKTEECED
LCPWCKGIFE PENIEKVAEN VVDALSEYEF DSFLIGTKLP KRFKELEKEI ETPFMESIRQ
EFGRELGKVV VPLVKRRVDK ENPDIVVMVN PYNQKVTLQV NPVFIKGRYK KLVRGIPQSH
WHCRACRGKG CEKCNFTGKQ YMTSVEEIIA EPFMEVMKGS SEALHGAGRE DIDVRMLGNG
RPFVIEIKEP KVRKVNLEEL ASKVNESETV EIINVEYGVK KDVHFFKNEP HKKTYLAHVE
CEEKVSNEEV AELVNELEDL TIDQRTPDRV SHRRADLVRV RKVYKAWPHM IDDYNFELKI
FCDGGLYIKE LISGDEGRTT PSVSELLNNK CICKFLDVLD VHDYDDVENI
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