| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1580 |
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| Symbol | |
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| ID | 4928247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1523693 |
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| End bp | 1524880 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640167084 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001098091 |
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| Protein GI | 134046606 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.136638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAA GCTACTCAAA ACGAATGGAA AAAATTAAAT CATCGGAAAT AAGGGAAATA
TTAAAAGTTA CCCAGAATCC TGAAATTATA TCTTTTGCAG GAGGCCTTCC TGCACCGGAA
CTCTTTCCTG TAGAAGAAAT AAAAGAAATT TCGGTACTTG TTCTTGATGA ACTGGGTCCA
GAGTCCCTCC AGTACGACGT AACTGAAGGG TACCTCCCAC TTAGACAGTA TATTTCAGAA
AGAATGAATA AAGTATTGAA AACAGATGTT ACAAAAGATA ACATTTTGAT CGTCTGCGGG
TCCCAACAAG GTTTGGACTT TTCTGGAAAA GTATTTTTGG ATGAAAATGA TGTAGTTTTA
TGTGAAAGTC CAACTTATCT TGGAGCAATC AATGCATTCA AATCATACGA ACCGCAGTTT
AAGGAAGTTC CAACTGACGA CTTCGGAATG ATTCCAGAAG AGCTTGAAAA AATTTTAAAA
ACGACATCGA ATGTAAAACT CATTTATGCG ATTCCTGATT TTCAAAACCC TACTGGAAAA
ACATGGACTC TTGAAAGAAG GGAAATATTC ATGGAAATAA TCGAAAAATA TGAAATTCCG
GTAATTGAGG ATAACCCTTA CGGAGAATTG AGATTTGAGG GAAAAATGTT GCCTTCATTA
AAATCAATGG ATCAGAATGG CCTTGTAATT CACTTAGGAA CGTTTTCAAA GACTTTTTGT
CCTGGTTTGA GGGTAGGGTG GATTGCTGCA TCAGAAAATA TCCTTGAAAA ATATATTCTT
GTAAAACAGA GCGGGGATTT GCACACATCG TCATTTTCTC AAAGGCTTAT TTCAAAAATG
CTTGAAAATT ATGATTTTGA TGAACGAGTC TCCAAATTAA AAGAATTATA CAAAGGAAGA
AGAGATTTGA TGATTAAAAC AATTGCAGAA GAATTTCCAA ACGGTCTCAA ATATACAAAT
CCTGAAGGCG GACTTTTTAC GTGGGTCGAA CTTCCTGAAA ATTATAATGC ACGTGAATTT
TTAGATGAAT GTATTAAAAA TAACGTTGCG ATCGTTCCAG GAGGATCATT CTTCCCAAAC
GGTGGCCATG AAAATTCATT TAGGCTGAAT TACTCGAACA TGTCTAATGA AAGAATAGTT
GAAGGAATTA AAAGACTTTC AAAAGTTTTA AAAGAATATT TAAATTAA
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| Protein sequence | MALSYSKRME KIKSSEIREI LKVTQNPEII SFAGGLPAPE LFPVEEIKEI SVLVLDELGP
ESLQYDVTEG YLPLRQYISE RMNKVLKTDV TKDNILIVCG SQQGLDFSGK VFLDENDVVL
CESPTYLGAI NAFKSYEPQF KEVPTDDFGM IPEELEKILK TTSNVKLIYA IPDFQNPTGK
TWTLERREIF MEIIEKYEIP VIEDNPYGEL RFEGKMLPSL KSMDQNGLVI HLGTFSKTFC
PGLRVGWIAA SENILEKYIL VKQSGDLHTS SFSQRLISKM LENYDFDERV SKLKELYKGR
RDLMIKTIAE EFPNGLKYTN PEGGLFTWVE LPENYNAREF LDECIKNNVA IVPGGSFFPN
GGHENSFRLN YSNMSNERIV EGIKRLSKVL KEYLN
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