| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1568 |
|---|
| Symbol | |
|---|
| ID | 4929188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1511893 |
|---|
| End bp | 1512864 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640167064 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001098079 |
|---|
| Protein GI | 134046594 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTAA AACTTGAAAA TATTTCAAAA AACTTCGAAG AAAACACGGT TTTAAAAGAT
ATTAATTTTG AATGCGCAGA AGAACTTGTA TCTCTTGTTG GTTCTAGCGG GTGTGGAAAA
ACAACGTGTT TAAGGGTTAT AGCAGGATTT GAAAAACCTG ATCAAGGCAG ACTTTTTTTG
AATGGTGAAG ATATAACAAA TCTTCCACCA AACAAGCGAA ATATCGGGAT GGTATTTCAA
AACTACGCAT TATTCCCACA TTTAACTGTT TTTGAAAATA TTGCATATGG TTTAAAGCTA
AAAAATCTAA GCAAAAATGA AATTTCAGAA AAAGTAAAAA ATTCAATAGA TATTGTGAAT
TTAGGGGGAT ATGAAACATA TTCTATCGAA GAATTGAGTG GTGGGATGCA GCAACGGGTT
GCAATTACAA GAGCAATGGT AATTGAACCA AAAGCAATGC TTTTAGATGA ACCTCTTAGT
AATTTAGATG CAAAACTCAG GATAAAGATG AGAAAAGAGC TTAAAGAATT ACAAAGAAGT
CTCGGGATTC CAACGATTTA TGTAACACAC GATCAAGAAG AAGCACTAGC ATTATCCGAT
AAAGTTGCAG TAATGAATAA AGGGATAATT GAACAGTTTG GAAAACCTTA TTCAATTTAT
TCAACTCCTA AAACAGAACA TGTGGCCAAA TTTATTGGAA TTGTTAATGA AATTCCCCTT
TCGATATTAA AAGAATTAAA TATTGAAAAT TACGCTGATA AAAAGTATTT TGTAAGGCCG
GAATCAATGA AATTTGGAAA CGGAAACTTT AATGGAAGAA TTTTAGATCA AGAATTCTTG
GGCAGTATTA CAAGATATGT TATAAAGCAC GGTGATTTTT TATTTACCAT TCAAACTAAT
AATTCAACAG ATTTTAGAAC AGGCGATGAA ATTTCATTTG ATTTTGATAA GAACAGTATT
ATTTCAATTT AA
|
|---|
| Protein sequence | MVLKLENISK NFEENTVLKD INFECAEELV SLVGSSGCGK TTCLRVIAGF EKPDQGRLFL
NGEDITNLPP NKRNIGMVFQ NYALFPHLTV FENIAYGLKL KNLSKNEISE KVKNSIDIVN
LGGYETYSIE ELSGGMQQRV AITRAMVIEP KAMLLDEPLS NLDAKLRIKM RKELKELQRS
LGIPTIYVTH DQEEALALSD KVAVMNKGII EQFGKPYSIY STPKTEHVAK FIGIVNEIPL
SILKELNIEN YADKKYFVRP ESMKFGNGNF NGRILDQEFL GSITRYVIKH GDFLFTIQTN
NSTDFRTGDE ISFDFDKNSI ISI
|
|---|
| |