| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1564 |
|---|
| Symbol | |
|---|
| ID | 4929164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1508568 |
|---|
| End bp | 1509224 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640167060 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001098075 |
|---|
| Protein GI | 134046590 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGGAA CATGCATGCG ATTTTCAAAA CCTGAAAAAG GAGTGGAATT TACCGATTGG
GGCCTTCATT TTTGTCCCAA TATTGATGAA CATTTTAAAA GTGGACTTAC TGGATTTCAC
GCACCTATCG TAGATATCGG AACCCCAAAT AAAACCGAAG GACTTAAAAC ACTAAAAAAT
GTAATTAATA ATATCCCTGG AGCAGATTAT TTAACGATAC ATCTCCATAA TGGAAAAGAA
CCCGAATACA ATACTCTTTT AGATAATGTT TCAGAATTAA ACGAATATTC TAAAGAAAGA
AACATTGAAC TTTGTATCGA AAATTTAAGA AAGGGATTTT CTTCAAAACC TGAAAATGTA
ATAAATGTTG CAGAAGCAAC CGGGTGCAAA ATAACGTTTG ATATCGGACA TACACCGTAT
GAAAACAGAA TGAACTGTAT AAACCTATTT TCAGATAAAA TTTACAACGT CCATACTTAC
GAGCGAGAGT GCGATAAAAT AGGACATGTT GCTCCAAAAG ATTTAACATA TTTAAAACCT
GTTTTAGACG GCCTGTTAGA TATTGGCTGC GATTTCTGGC TTATTGAACT GATGAATGTT
GAAGAAATAA AAAATACGAA AAACATGTTG AATAAATACC TTGAATACTA TAGATAA
|
|---|
| Protein sequence | MIGTCMRFSK PEKGVEFTDW GLHFCPNIDE HFKSGLTGFH APIVDIGTPN KTEGLKTLKN
VINNIPGADY LTIHLHNGKE PEYNTLLDNV SELNEYSKER NIELCIENLR KGFSSKPENV
INVAEATGCK ITFDIGHTPY ENRMNCINLF SDKIYNVHTY ERECDKIGHV APKDLTYLKP
VLDGLLDIGC DFWLIELMNV EEIKNTKNML NKYLEYYR
|
|---|
| |