| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1509 |
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| Symbol | |
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| ID | 4927891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1451567 |
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| End bp | 1452949 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640167005 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001098020 |
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| Protein GI | 134046535 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.712333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA CCAAAGGTGT TCAAAATCTA CTTGGAGACC CGAAAAAAGC CATTGTAAAA
GTTTCAGTAC CAATGATCAT TGCAATGTCT TTTCAATCAT TATACAACAT AATCGATGCG
ATATGGGTTG CAGGACTTGG TTCAGATGCC CTTGCGGCAA TTGGGTTATT CTTTCCATTC
TCTTTCGCAC TAATTGCTCT TTCGAATGGT GTAGGAATTG GGGGGAGTTC TGCAATTTCA
AGACGAATTG GGCAGAAAAA TAAAAGCGCA GCAGATAACA TTGCAGTTCA TTCTGTTGTA
CTTGGGATAA TCATTGGAAT TTTATTAATC GGAGCTATTC CATTTTTGGG GAACATTTTT
TCAGTTATCG GAGCATCGGG AACCACTGTT ACAATGGCAG TTGAATATTC TACAATTTTA
TTCGGAGGTG CTGTTATTCT CCTGTTTACA AATATTGCAA ATGCAATTTT GAGAGGAGAG
GGGGACACTA AAAGAGCGAT GTATGCGATA ATTCTTGGAT CGGTTTTGAA TATTGTGCTT
GACCCGATTT TTATATATGT ATTGAATATG GGCATAGCAG GTGCCGCATG GGCCACATTA
ATTTCTATGT TAATTACTAG CCTTTTATTC GTATACTGGC TTTTCATAAA AAAAGATACG
TTTGTAAATA TTCATTTTAA AGATTTTAAG ATGAATTTGA ACATAATAAA AGAAATATTC
TCAATAGGAA TTCCTGCTTC TGTTTCACAG CTTACAATGG CCACTTCAAT GTTTTTATTG
ACTGCGATTG TGGCAAAGGC TGGCGGAAAT AATGGAATTG CAGTTTTCTC AACAGGCTGG
AGGATCGTGT CCATGGGAAT CATTCCTATG GTGGGATTTG CAACAGGAGT TACTGCAGTA
ACTGGGGCGG CATACGGCTC TGCAAACCCT GAAAAATTGG AAATTTCTTA TAAATACGCC
ATAAAAATGG GAATTCTCAT TGAATTAGTA GTTGCAGTGT TGATTTTATT ATTTGAAAAT
CAGATTGCGT ATTTATTTAC CTACTCAGAA AGTTCAGTGC ATATTTTGGG CGATTTACTG
GTATTTTTAA AATACATGTT TGTATTCTAC CCAACAATGC CGCTTGCAGT GCTTACTTCT
GCAATGTTTC AGGGCGTTTC GAGAGGGAAA AATTCATTGT TTATATCATT CCTAAGAACG
ATAATCCTGC AAGTTCCAAT GGCATACCTC TTTGGGGTAA CATTTAACCA GGGATTAACA
GGAGTCTGGT TTGGAATGAT TGTGGGACAC GTTATTGCAG TATCTATTGC ATATTTACTT
GGATTATACA CAATAAAACA GTTAAAAACA ACATTAACAC CAGAAACGGT AAAATTTAGG
TAA
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| Protein sequence | MKTTKGVQNL LGDPKKAIVK VSVPMIIAMS FQSLYNIIDA IWVAGLGSDA LAAIGLFFPF
SFALIALSNG VGIGGSSAIS RRIGQKNKSA ADNIAVHSVV LGIIIGILLI GAIPFLGNIF
SVIGASGTTV TMAVEYSTIL FGGAVILLFT NIANAILRGE GDTKRAMYAI ILGSVLNIVL
DPIFIYVLNM GIAGAAWATL ISMLITSLLF VYWLFIKKDT FVNIHFKDFK MNLNIIKEIF
SIGIPASVSQ LTMATSMFLL TAIVAKAGGN NGIAVFSTGW RIVSMGIIPM VGFATGVTAV
TGAAYGSANP EKLEISYKYA IKMGILIELV VAVLILLFEN QIAYLFTYSE SSVHILGDLL
VFLKYMFVFY PTMPLAVLTS AMFQGVSRGK NSLFISFLRT IILQVPMAYL FGVTFNQGLT
GVWFGMIVGH VIAVSIAYLL GLYTIKQLKT TLTPETVKFR
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