| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1499 |
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| Symbol | |
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| ID | 4927801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1441332 |
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| End bp | 1443686 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640166995 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001098010 |
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| Protein GI | 134046525 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.402308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGACT TAGTAGTTGC AGAAGCCTAT CAGGGAGATG TAGGTAAGGG AATTGTAAGA
ATTGATCCAT TAACAATGGA GAAATTATCA ATAAAAGCCG GAGATGCAAT AGAAATTGCA
GGGAAGGAAA AAACCTACGC AACCGTTTGG AGAGGGTACC TTGAAGACCA GGGTAAAGGT
ATCATAAGAA TGGACGGTAT TTTAAGACAA AATACTAAAG CAGGTATTGG GGATAAGGTA
AAAATTACCG TAGTGGAAGT AAAAGAAGCT AAAAAGGTAA CACTAGCTCC AATGCAGGCT
GTAAGATTCA GCACAGGATT TGAAAGCTAT GTTGGAAGCA GGCTTGTAGA TCAGGTTGTC
GATAAAGGAT CCAAAGTAGT AATTGGAGTT TTGGGAACTG CATTTCCATT TATCGTAACA
GGAACTACTC CAAAAGGACC TGTAAAAATT AACGAATATA CTCAAATTGA GTTAAAAACT
GAACCGGTTA CAGAATTAAA AGAAACCAAA GTTCCAAATG TAACCTATGA AGACATTGGT
GGTTTAAAAG AAGAAGTCAA AAAAATCAGG GAAATGGTTG AACTTCCAAT GAGATACCCG
GAATTATTTG ATAAACTTGG TATCGAACCT CCAAAAGGAG TTTTACTTGC AGGACCTCCA
GGAACTGGTA AAACATTGCT TGCAAAAGCT GTTGCAAACG AAGCAGGTGC TAATTTCTAC
ACCATTAACG GCCCTGAAAT AATGAGTAAA TACGTCGGTG AAACCGAAGA AAATTTAAGA
AAAATATTTG AAGAAGCTGA AGAAAACTCG CCTTCAATCA TATTCATTGA CGAAATCGAC
GCAGTAGCTC CAAAAAGGGA TGAAGCTAGC GGTGAAGTTG AAAGAAGAAT GGTTGCACAG
CTTTTGACAT TGCTTGACGG TTTAGAAGGT AGGGGCCAGG TTGTAATTCT TGCAGCTACA
AACAGGCCGG ATTCAATTGA TATGGCTTTA AGAAGACCTG GAAGACTAGA TCGGGAATTA
ACAATTGGAA TTCCCGATAG GCATGCGAGA AAAGAAATTT TACAGATCCA TACAAGAAAC
ATGCCTCTTC AGCCAGATTA CGAGAAAAAT GAAGTAATTC CTGTATTAAA TGAACTTATC
GGGGAATTTG AAAGAACTAA GATCGAAAAT ACAGTTAAAT TGGTTGAAAA AGCGTCTTCA
GAAGCAGAAA TTGAAAAAAT ACTCAAAGAT GAAGACATAG AAGATAAAGT AAAATCAAAA
TTAAACCAGA TCATGGTAAA AGAACTTGCA GACAAAACTC ACGGATTTGC AGGTGCTGAC
TTAGCTGCTC TTTCAAAAGA AGCTGCTATG AAAACCTTGA GAAGATTACT CCCCGATATC
GACCTTGAAA AAGAAGAAAT TCCTAGAGAA GTACTCGATA AAATTAAAGT AACTAAAGAT
GACTTTGTAG GTGGTTTAAA AGAAGTAGAG CCATCTGCTC TTAGAGAAGT GTTGGTAGAA
GTTCCAAATA TCAAATGGAG TGATGTTGGA GGACTTGAAG ACATTAAACA GGACTTAAAA
GAAGCTGTTG AATGGCCAAT TAAAAACAGG GAAATGTTTG AAAGAATGGG AATAAGGCCT
CCAAAAGGAG TATTACTCTT CGGTCCCCCT GGAACTGGTA AAACACTCCT TGCAAAAGCT
GTTGCAAACG AAAGTGAAGC AAATTTCATA AGCGTAAAAG GTCCTGAAAT ATTCAGCAAA
TGGGTTGGAG AAAGCGAAAA AGCAATCCGT GAAATATTTA GAAAAGCAAG ACAGGCTGCA
CCAACAGTCA TTTTCTTTGA TGAAATTGAC TCAATAGCTC CAAAAAGAGG AATGAGCTTT
GGGGGTAGCG GGGTTAGCGA AAAAGTGGTA AACCAGCTTT TAACTGAACT CGATGGTCTT
GAAGAACCTA AAGACGTTGT AATTATTGCT GCGACAAATA GGCCGAACTT ATTAGATCCT
GCACTTTTAA GGCCAGGAAG ACTCGACAGG ATCGTTTTGG TAACAGTTCC TGACGAAAAT
GCAAGATTTG AAATATTCAA AGTTCACACC AAAGGAATGC CTATTGGAAA AGACGTGAAT
CTCCAAAAAC TTGCAAAAGA AACTAATGGA TACACTGGTG CAGACATCGA AGCACTTTGT
AGGGAATCTG CGATGATCGC ACTAAGAGAA AACGTCAATT CAGAGCATGT TGAATTAAAA
CACTTTGAAG CCGCGTTCAA AAGAATTGCT CCTTCGGTAA AAGATGAAGA CATGGATGAA
TACAGAGACC TTGCAAAAGA ATACGGAAGA ACTACTGGAG TATCCGAAAT TGAAACTCCT
GAAGAAACCA AATAA
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| Protein sequence | MVDLVVAEAY QGDVGKGIVR IDPLTMEKLS IKAGDAIEIA GKEKTYATVW RGYLEDQGKG
IIRMDGILRQ NTKAGIGDKV KITVVEVKEA KKVTLAPMQA VRFSTGFESY VGSRLVDQVV
DKGSKVVIGV LGTAFPFIVT GTTPKGPVKI NEYTQIELKT EPVTELKETK VPNVTYEDIG
GLKEEVKKIR EMVELPMRYP ELFDKLGIEP PKGVLLAGPP GTGKTLLAKA VANEAGANFY
TINGPEIMSK YVGETEENLR KIFEEAEENS PSIIFIDEID AVAPKRDEAS GEVERRMVAQ
LLTLLDGLEG RGQVVILAAT NRPDSIDMAL RRPGRLDREL TIGIPDRHAR KEILQIHTRN
MPLQPDYEKN EVIPVLNELI GEFERTKIEN TVKLVEKASS EAEIEKILKD EDIEDKVKSK
LNQIMVKELA DKTHGFAGAD LAALSKEAAM KTLRRLLPDI DLEKEEIPRE VLDKIKVTKD
DFVGGLKEVE PSALREVLVE VPNIKWSDVG GLEDIKQDLK EAVEWPIKNR EMFERMGIRP
PKGVLLFGPP GTGKTLLAKA VANESEANFI SVKGPEIFSK WVGESEKAIR EIFRKARQAA
PTVIFFDEID SIAPKRGMSF GGSGVSEKVV NQLLTELDGL EEPKDVVIIA ATNRPNLLDP
ALLRPGRLDR IVLVTVPDEN ARFEIFKVHT KGMPIGKDVN LQKLAKETNG YTGADIEALC
RESAMIALRE NVNSEHVELK HFEAAFKRIA PSVKDEDMDE YRDLAKEYGR TTGVSEIETP
EETK
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