Gene MmarC5_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1479 
Symbol 
ID4927695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1414928 
End bp1415569 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content38% 
IMG OID640166974 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001097990 
Protein GI134046505 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCAA TCCCTGGAAG CGAGCTTTTA AGCAGCACAC TTCACATAAT TTCCCAGAGC 
CTATTACTGC CTGTTGTTGT GTTTTTATTA CTCTTCATGG CATATGCGGT TATAAATTTT
GGGGAATTCA TGGCAGAATA TTCAAGCAGG ATTAAGGTTA ATTCAAAGGA TCTAAAAAAC
ATGATAAATA CATTCCCTGA TAAAAATGCT CAAGAAATAT CAAATTTAAT TTCAGACATG
AGATTAAACA AGGTTCACAT TGGAATTATC AAGGAATTGT GTGAAGAAGG TTGCGCTGAC
TTAAAAATGA CAGAATCGCA TGCCAGAAAC TTGATAGAAA AGGAAGAATT GAGACTAGAA
AAAACGCTTG AAAAAACAGA TTTCGTAACA AGACTTGGAC CTACACTCGG TTTAATGGGA
ACTTTAATTC CTATGGGGCC AGGTCTTGCA GCACTAGGGG CTGGAGATAT ACATGCACTT
GCAAATGCGA TAATCATTGC ATTTGATACA ACTGTTGTCG GTCTTGCTGC AGGGGGAATC
TGCTATGTTA TTTCAAAGGT TAGAAGAAGA TGGTACGAAG AACAGATGTC TACTCTTGAA
GTATTGATTG AATCCGTCTT GGAGGCATTG AAAAAATGTT AA
 
Protein sequence
MVAIPGSELL SSTLHIISQS LLLPVVVFLL LFMAYAVINF GEFMAEYSSR IKVNSKDLKN 
MINTFPDKNA QEISNLISDM RLNKVHIGII KELCEEGCAD LKMTESHARN LIEKEELRLE
KTLEKTDFVT RLGPTLGLMG TLIPMGPGLA ALGAGDIHAL ANAIIIAFDT TVVGLAAGGI
CYVISKVRRR WYEEQMSTLE VLIESVLEAL KKC