Gene MmarC5_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1477 
Symbol 
ID4927681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1414040 
End bp1414447 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content33% 
IMG OID640166972 
Productprotein tyrosine phosphatase 
Protein accessionYP_001097988 
Protein GI134046503 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.334169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGGACT CTTCTGAAAT TTCAAATAAA AAAATAGCAT TTGTATGCAT CCACAACAAA 
AGAAGGAGTG TTATCGCAGA ATCTTTTGCC AAAAATCTAG GATTAAATGC ATATAGTGCA
GGCCTTGAAA AAACAGAGAA TGTCGATAAA CTTGTAGTCG AGGTAATGAA TGAACTGGGA
CTAAACGTTA AGGAAAAACC AGAAACTATT CCCGAACTTA CTAAAAAAAT AGGAAATATT
GATATTTTAG TTACTATGGG TTGTATTGGT GCTTGCCCGA TTGTTCCTGC AAAAAAATAT
ATCGCCTGGA ATATAAAAGA CCCTGCTGGA AAAGACATTG AAGTTTATCG AAGAATTAGG
GATGAAATAG GAAAAAAAGT CGAAGAACTC AAAAAAAATA AATTTTAA
 
Protein sequence
MEDSSEISNK KIAFVCIHNK RRSVIAESFA KNLGLNAYSA GLEKTENVDK LVVEVMNELG 
LNVKEKPETI PELTKKIGNI DILVTMGCIG ACPIVPAKKY IAWNIKDPAG KDIEVYRRIR
DEIGKKVEEL KKNKF