Gene MmarC5_1476 details

Gene Information

• Locus tag: MmarC5_1476
• ID: 4927674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 1413261
• End bp: 1413941
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640166971
• Product: TPR repeat-containing protein
• Protein accession: YP_001097987
• Protein GI: 134046502
• COG category: [R] General function prediction only
• COG ID: [COG4783] Putative Zn-dependent protease, contains TPR repeats

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.818932
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAATTAA AGGGGGTTTT AATACTATTT TCAATTCTTT TTATTATGAA TACCTGTTTT 
GCAATAAATA ATGATTCAAA AACGACTGAT GAATTGTACG AAGAAGGAAA AGAGTACTAT 
AACAACGGAA GCTATTTGAA GGCTGTTGAA TGTTATGATA AAGTTTTGGA AATGGATCCC 
AAATATCCAA GAATAATGCT TACTAAAAAC TTGGCACTTT CAAAAATTAA TCGTAGTGAA 
AGGGCAATTG AATATTATGA CAATGGAACT TACTTTTACA ACCGCGGGCA GTATGAAAAC 
GCCATTGCCT GTTATGAAGA AGCCCTAAAA GCGGATCCGA ACTATACTTA TGCAGTGGTA 
TTCAAAGGTG TTGTTTTTAT TAGCCTTAAG CAATATGAAG ACGCTGTTGA ATGTTCTGAT 
AAAGCTCTAG AATTAGATCC AAACCATGTT AGTTTATGGC TCTGTAAAGC GGGGGCATTA 
GCTAATTCAA ATCCTAATGA ATGTATTGAA TATTGCAGTG AGGCCCTTAA ATTATATCCT 
AACGATTCAT TGTTCTGGTT TTTTAAGGGA AGTTCATTAA GTAAAATTGA TAAATGTGAA 
GAAGCAGATG AATGTTTTGA TAGAGCAGTA GAGTTGAATC CAACTATTCT TTATCTTGGG 
TATGTAAAGG ATCTAACTTA G 

 

Protein sequence

MKLKGVLILF SILFIMNTCF AINNDSKTTD ELYEEGKEYY NNGSYLKAVE CYDKVLEMDP 
KYPRIMLTKN LALSKINRSE RAIEYYDNGT YFYNRGQYEN AIACYEEALK ADPNYTYAVV 
FKGVVFISLK QYEDAVECSD KALELDPNHV SLWLCKAGAL ANSNPNECIE YCSEALKLYP 
NDSLFWFFKG SSLSKIDKCE EADECFDRAV ELNPTILYLG YVKDLT