Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1474 |
Symbol | |
ID | 4927665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1411420 |
End bp | 1412100 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640166969 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001097985 |
Protein GI | 134046500 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0190453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAGT CAATCTTGTC ACAGTTTAAT TTGGAGCTAT TTATTAAGAT AATTCCTCAA TTAATCGATG GATCCATATT GACCATTAAA ATAACTGTTT TTTCGATAAT CATCGGATTA TTTTTGGGTA CAATTCTTGG AATGGGCAGA ATTTCGTACA ATATTGTTTA TAGATACATT TCTTCGTTTT ACATCGAATT TGTAAGAGGA ACTCCGCTTT TAGTACAGAT TATGATTATT TATTTTGGAC TTCCGTCCTT TGGAATAAAT TTAAGCGCAT ATACTGCAGG TATTTTAGCC CTCGGGTTAA ATAGTGGCGC TTATGTTGGA GAAATTATAA AAGCTGGAAT CTTGTCAGTT CACGTTGGAC AGATGGAAGC TGCAAGAAGC CTTGGGATGA ATTATGCGCA AGCCATGAGA TACATAATCT TACCACAGGC ATTTAGAAAC GTTCTTCCAG CAATTGGAAA CGAATTTATA TTACTATTAA AAGATTCGTC ACTTTTATCC GTAATCGCCA TTGTGGAATT AACAAGGGTT GGAAAACAAA TATACAGCAG TACGTACAAT GCTTGGACCC CCCTCTTAGG AGTTGCTTTA TTTTACCTAA TCATGACTCT TCCGTTGAGT AAACTAGTAC AACATATTGA GAACAGGTGG AAAATTGATA GAAATGGTTA A
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Protein sequence | MAQSILSQFN LELFIKIIPQ LIDGSILTIK ITVFSIIIGL FLGTILGMGR ISYNIVYRYI SSFYIEFVRG TPLLVQIMII YFGLPSFGIN LSAYTAGILA LGLNSGAYVG EIIKAGILSV HVGQMEAARS LGMNYAQAMR YIILPQAFRN VLPAIGNEFI LLLKDSSLLS VIAIVELTRV GKQIYSSTYN AWTPLLGVAL FYLIMTLPLS KLVQHIENRW KIDRNG
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