Gene MmarC5_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1474 
Symbol 
ID4927665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1411420 
End bp1412100 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content35% 
IMG OID640166969 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001097985 
Protein GI134046500 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0190453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGT CAATCTTGTC ACAGTTTAAT TTGGAGCTAT TTATTAAGAT AATTCCTCAA 
TTAATCGATG GATCCATATT GACCATTAAA ATAACTGTTT TTTCGATAAT CATCGGATTA
TTTTTGGGTA CAATTCTTGG AATGGGCAGA ATTTCGTACA ATATTGTTTA TAGATACATT
TCTTCGTTTT ACATCGAATT TGTAAGAGGA ACTCCGCTTT TAGTACAGAT TATGATTATT
TATTTTGGAC TTCCGTCCTT TGGAATAAAT TTAAGCGCAT ATACTGCAGG TATTTTAGCC
CTCGGGTTAA ATAGTGGCGC TTATGTTGGA GAAATTATAA AAGCTGGAAT CTTGTCAGTT
CACGTTGGAC AGATGGAAGC TGCAAGAAGC CTTGGGATGA ATTATGCGCA AGCCATGAGA
TACATAATCT TACCACAGGC ATTTAGAAAC GTTCTTCCAG CAATTGGAAA CGAATTTATA
TTACTATTAA AAGATTCGTC ACTTTTATCC GTAATCGCCA TTGTGGAATT AACAAGGGTT
GGAAAACAAA TATACAGCAG TACGTACAAT GCTTGGACCC CCCTCTTAGG AGTTGCTTTA
TTTTACCTAA TCATGACTCT TCCGTTGAGT AAACTAGTAC AACATATTGA GAACAGGTGG
AAAATTGATA GAAATGGTTA A
 
Protein sequence
MAQSILSQFN LELFIKIIPQ LIDGSILTIK ITVFSIIIGL FLGTILGMGR ISYNIVYRYI 
SSFYIEFVRG TPLLVQIMII YFGLPSFGIN LSAYTAGILA LGLNSGAYVG EIIKAGILSV
HVGQMEAARS LGMNYAQAMR YIILPQAFRN VLPAIGNEFI LLLKDSSLLS VIAIVELTRV
GKQIYSSTYN AWTPLLGVAL FYLIMTLPLS KLVQHIENRW KIDRNG