Gene MmarC5_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1464 
Symbol 
ID4927603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1400117 
End bp1401586 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content37% 
IMG OID640166959 
ProductNa+/solute symporter 
Protein accessionYP_001097975 
Protein GI134046490 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.675757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCACT ATTTGTTTTT GGCGATTTAT GTTACTATGA TTATAGGAAT AGCAACGGTA 
ACGAAAAAAA GGATAAAAGG AGTTTCTGAC TTTTTACTGG GGGGGAGAAA CGTAAACCCT
TGGATGTCTG CATTTTCATA CGGTACAGCT TACTTTTCAG CGGTTATTTT TATCGGTTTT
GCTGGAAAAA TGGGTTGGAG TTTTGGAATC CCAACAATGT GGATAGTTGT TGGAAACACG
ATTATTGGAA GTTTTTTAGC ATGGCAGGTT CTTGGTAAAA AAACAAGAGA AATGACACAA
AGACTAGGCG CTTCAACAAT GCCGAGTTTT TTGGAAAAAA GGTATAAAAG CAAGAATTTG
GAATCATTAA CTGCGTTCAT CATATTTTTC TTCTTAGTTC CATATTCTGC ATCTATTTAT
AAAGGTTTAA ATTTCCTGTT TGAAGGATTC GGGATATCTC CAATGAATGC ATATATTTTA
ATGGCAGCAT TAACTGCGAT ATACCTGTAT TTTGGAGGAT TTATTGCAGC AACACTCGCA
GACTTTGTCC AGGGCTGTAT CATGGTAATC GGGGTACTTT TAATGGTATT CTTTTTAAGT
AGCAACCCTG AAGTTGGAGG ATTTTCCGGA ATGCTATCGA ATTTAAGTTC AATAGATCCA
ATTTTAGTAT CTCCAATAAG TGAAGCGAGC TTTATTCCAA TAATTGGACT TGCTTTGCTC
ACAAGTATTG GTAGCTGGGG TCTTCCGCAG ATGATACACA AGTTTTACAC GATAAAAAGT
GAAAAAGCAG CAGTTTCTGC AAAATGGGTT TCAACAGCAT TTGCATTTAT CATTACTTTT
GGTGCAGCAT ATATTGGAAC CGTAAGTAGA CTTTTCTATC CTGACGCCGC TTCAAAAGTT
GCAGCGGGCT TAACAAGCCC TGATATGATA GTTCCAAAAA TAATGGAAAT TGCGCTTCCT
GACTGGGTTG CAGCATTAAT TCTCGTACTC GTAATTTCAG CTTCAATGTC TACCTTAGCA
TCATTAGTAC TTGCTTCAAG TTCTGTTGTT TCAATAGACT TTGTAAAAGG AAGATTAAAA
CCTGATTTAT CCGATAAAAA CACGATGATA TTGATGAGAT TATTATGCGT TTTATTCGTT
GCACTGTCAT TCGTACTTGC AATAGTTCCA AACAGCTATG TTCTCTCATT AATGGCTCTT
TCATGGGGTT TAGTATCAGG ATGTCTTTTG GCCCCGTACT TTTTGGGATT ATACTGGAAG
AGAACTACAA AAGAAGGAGT ATGGGCAGGA ATCACATCTG CACTGGCAAT CATGCTTGGT
GGAGCATGCT ACTTTGGAGT AAACAGCGTT TACATGCCTG CAGTTGGTTC TTTAGCAATG
ATTGCACCGA TATTCGTTGT AATGGCAGTA AGTCTTATCA CGAAACCATT CGAAAGCGAA
CATATCGATT ACATATTCAA TAAAAAATAA
 
Protein sequence
MWHYLFLAIY VTMIIGIATV TKKRIKGVSD FLLGGRNVNP WMSAFSYGTA YFSAVIFIGF 
AGKMGWSFGI PTMWIVVGNT IIGSFLAWQV LGKKTREMTQ RLGASTMPSF LEKRYKSKNL
ESLTAFIIFF FLVPYSASIY KGLNFLFEGF GISPMNAYIL MAALTAIYLY FGGFIAATLA
DFVQGCIMVI GVLLMVFFLS SNPEVGGFSG MLSNLSSIDP ILVSPISEAS FIPIIGLALL
TSIGSWGLPQ MIHKFYTIKS EKAAVSAKWV STAFAFIITF GAAYIGTVSR LFYPDAASKV
AAGLTSPDMI VPKIMEIALP DWVAALILVL VISASMSTLA SLVLASSSVV SIDFVKGRLK
PDLSDKNTMI LMRLLCVLFV ALSFVLAIVP NSYVLSLMAL SWGLVSGCLL APYFLGLYWK
RTTKEGVWAG ITSALAIMLG GACYFGVNSV YMPAVGSLAM IAPIFVVMAV SLITKPFESE
HIDYIFNKK