Gene MmarC5_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1458 
Symbol 
ID4927579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1394084 
End bp1395811 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content36% 
IMG OID640166953 
Productglycyl-tRNA synthetase 
Protein accessionYP_001097969 
Protein GI134046484 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0423] Glycyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00389] glycyl-tRNA synthetase, dimeric type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT ACGATAAAAT AATTGATTTA ACCAAAAGAA GAGGATTCTT GTGGAATTCC 
TTTGAAATAT ACGGCGGTAT TGCAGGATTT TTCGACTACG GGCCACTCGG TGCAATTTTA
AAAAATAACG TCATAAATAC GTGGAGAAAA CACTACATCG TAAATGAAGG ATTTTACGAA
ATAGATAGCC CAACGGTAAC TCCTTACGAA GTTTTAAAAG CATCCGGACA CGTTGAAAAC
TTTACAGACC CACTTGTAGA ATGTAAAAGC TGTCTTGAAT CATTTAGGGC TGACCACATC
ATCGAAGAAA ATGTAGACGT TGATACTGAA GGAAAAACTT TACAAGAACT TCAAGAAATG
ATTGAAAAAA ATAACATCAA GTGTCCAAAA TGTGGTGGAG AATTTAAAGA AGTTAGCACA
TTTAATTTGA TGTTTGCAAC TTCAATTGGC CCGGGAGGAA AAAGAGCTGC ATTTATGAGG
CCAGAAACAG CTCAAGGTAT CTTCATACAG TTTAAAAGAA TAAGCCAGTT CTTTAGAAAC
AAGCTTCCAT TTGGTGCAGT TCAGATTGGA AAAGCATACA GAAATGAAAT TTCACCAAGA
CAGGGCGTTA TTAGATTAAG AGAATTTACG CAAGCTGAAG GTGAATTTTT CATTGATTCA
AGGAAAAAAG AGAACTTTGA GAAATTTGAA AGCGTAAAAG AGATAGTTTT ACCATTACTC
TCTGGTAAAA ATCAAGAAAA CGAATCACTA AGTGCTGAAG AAAAAATTGT CAGAATGAGT
CTTTCTGATG CTGTTAAAAA CGGAATAATC GCACACGAAG CAATTGCATA CTACATTGCA
GTTACAAAAA AGTTCTTGAT GGAAATTGGA ATAGATGAAT CAAAATTACG ATTCAGGCAG
CACCTTCCAA ACGAAATGGC ACACTACGCG GCTGATTGTT GGGATGCAGA ATTATATACT
GATAGATACG GCTGGATCGA GTGTGTCGGT ATTGCTGACA GGACCAACTA CGATTTATTG
GCCCACATGA AAAACAGCAG TGAAGATCTA TCAGTATTTG TAGAACTTGA CGAAGATAAA
GAAATCGAAG TTTACGAAAT CGAATTAAAC TACAAATTAG TCGGTAGAAC CTTTAAGGGC
GATTCAAAAG TTTTAGAAGA GTCTTTAAAA GAATTAGACG ACAAAAAAAT GGAAGAATTG
GTAGAAGCTC TCGAAACGGA AGGAAAATAT GTTTTAAGTA CTTGCAAAAG AGACTTTGAA
TTATTGAAAG AATATTTAAC TGCTAAAAAA GTTAAAAAGA CCGTTAAAGG AGAAAAAATA
ATTCCCCACG TAATCGAGCC TTCATACGGT ATCGACAGGA TTACCTACTG TGTTATGGAA
CATGCGTTCA AAGAAGATGA AGATAGAACC GTAATGGGCT TTTCAAATGC AGTTTCTCCG
ATAAAGGTAG GTGTTTTCCC ACTTGTTAAC AAAGAAGGAA TGCCTGAAAT TGCAATGGAT
TTGAAAAATA AATTAAGAGA AAACGGTTTA ATTGCAGAAT ACGACGACAG TGGTGCAATC
GGTAGAAGAT ACATGAGAAT GGACGAGGTA GGAACTCCTT TCTGTGTAAC TATCGATGGA
GAAACTCTAA CAGACAGTTC GGTTACCATC AGAGAAAGAG ATTCAAGAGA ACAGTTCAGA
ATCCCAATAA ACGAAGTTGT ACCGTACATT AAAGATAAAC TAAATTAA
 
Protein sequence
MDKYDKIIDL TKRRGFLWNS FEIYGGIAGF FDYGPLGAIL KNNVINTWRK HYIVNEGFYE 
IDSPTVTPYE VLKASGHVEN FTDPLVECKS CLESFRADHI IEENVDVDTE GKTLQELQEM
IEKNNIKCPK CGGEFKEVST FNLMFATSIG PGGKRAAFMR PETAQGIFIQ FKRISQFFRN
KLPFGAVQIG KAYRNEISPR QGVIRLREFT QAEGEFFIDS RKKENFEKFE SVKEIVLPLL
SGKNQENESL SAEEKIVRMS LSDAVKNGII AHEAIAYYIA VTKKFLMEIG IDESKLRFRQ
HLPNEMAHYA ADCWDAELYT DRYGWIECVG IADRTNYDLL AHMKNSSEDL SVFVELDEDK
EIEVYEIELN YKLVGRTFKG DSKVLEESLK ELDDKKMEEL VEALETEGKY VLSTCKRDFE
LLKEYLTAKK VKKTVKGEKI IPHVIEPSYG IDRITYCVME HAFKEDEDRT VMGFSNAVSP
IKVGVFPLVN KEGMPEIAMD LKNKLRENGL IAEYDDSGAI GRRYMRMDEV GTPFCVTIDG
ETLTDSSVTI RERDSREQFR IPINEVVPYI KDKLN