Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1409 |
Symbol | |
ID | 4929268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1350982 |
End bp | 1352037 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640166905 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001097921 |
Protein GI | 134046436 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTAG ATCAATTATA TTTTGGAAAT ACATTGTATT CATACATGAT ATTTTTAATA TTCATATTTT TTGGAATATT TTTTGGAAAA GTAATGTACA TATTTTTAAA TAAGTATGTA CGAGTTCTTG CAGGAAAAAC AAAGACTAAA TTAGATGATG TAGTACTTGA TGCAGTAGAA ATTCCGTTAA TAATTGTTGT TTTTGTTTTA TTTTTTAAGT ATGGCTTAAA AAATTTAGTT TTACCTGATC ATCTAGCTTT GTGGCTCAAT GAATCCTTAA CGGTAGCACT AACTTTTGCA GGAGTTTTAT TTTTACTTAA AATTGTGGAT GATATAATTG TAAATTATGT GGTTCCAATT GTTGAAAAGT CAGAAAATAA ACTCGACGAC CAGCTTGTTC CTTTAATGAG AAAACTGGTC AAATTTTTGA TTTTTATTGC AGGTTTGCTG CTTATTTTAT CAAATGTTGG TTATAACATT TCAGCACTTC TTGCAGGACT TGGTATCGGT GGTTTGGCAG TTGCGCTTGC TGCAAAAGAT ACAATCGAAA ATTTAATTGC TGGATTTATT ATAATTGTTG ACAGGCCTTT TAAACTGGGC GACTGGATAA ACTGGGGCGG AAAGGAGGGT ATTGTAGAAG AAGTTGGAAT CCGGAGTACG CGGGTTCGTT CATTTGGAGA TACCATAATC ACTGTTCCAA ATGCAAACAT CGTCCAAACT GAAATTGAAA ACTTCTCAGA ACGGAGAAAA AGACAGGTAA AAGCAACAAT TGGTTTAACT TATGATACAC CTGTTGACAA AGTAAAACGT GCAAAAGAAA TAATAGAAAA CGTTTTAAAT GATCATCACG GAGTTGTAGA TCCTATAAGG GTTTCATTCG TTGAATTTGG AAGTTTTTCA CTTGATTTAA GGGTGGAATA CTTTGTAAGG GATTTCGGGT TTGATTTCTT CTTAAATACA AAGGATGAAG TAAATATAAA AATCAAAGAA GAATTTGAAA AAGAGAATAT CGAATTTGCA TTCCCTACGC AGACTGTATA CTACAAAAAA GAATAA
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Protein sequence | MALDQLYFGN TLYSYMIFLI FIFFGIFFGK VMYIFLNKYV RVLAGKTKTK LDDVVLDAVE IPLIIVVFVL FFKYGLKNLV LPDHLALWLN ESLTVALTFA GVLFLLKIVD DIIVNYVVPI VEKSENKLDD QLVPLMRKLV KFLIFIAGLL LILSNVGYNI SALLAGLGIG GLAVALAAKD TIENLIAGFI IIVDRPFKLG DWINWGGKEG IVEEVGIRST RVRSFGDTII TVPNANIVQT EIENFSERRK RQVKATIGLT YDTPVDKVKR AKEIIENVLN DHHGVVDPIR VSFVEFGSFS LDLRVEYFVR DFGFDFFLNT KDEVNIKIKE EFEKENIEFA FPTQTVYYKK E
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