Gene MmarC5_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1409 
Symbol 
ID4929268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1350982 
End bp1352037 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content32% 
IMG OID640166905 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001097921 
Protein GI134046436 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAG ATCAATTATA TTTTGGAAAT ACATTGTATT CATACATGAT ATTTTTAATA 
TTCATATTTT TTGGAATATT TTTTGGAAAA GTAATGTACA TATTTTTAAA TAAGTATGTA
CGAGTTCTTG CAGGAAAAAC AAAGACTAAA TTAGATGATG TAGTACTTGA TGCAGTAGAA
ATTCCGTTAA TAATTGTTGT TTTTGTTTTA TTTTTTAAGT ATGGCTTAAA AAATTTAGTT
TTACCTGATC ATCTAGCTTT GTGGCTCAAT GAATCCTTAA CGGTAGCACT AACTTTTGCA
GGAGTTTTAT TTTTACTTAA AATTGTGGAT GATATAATTG TAAATTATGT GGTTCCAATT
GTTGAAAAGT CAGAAAATAA ACTCGACGAC CAGCTTGTTC CTTTAATGAG AAAACTGGTC
AAATTTTTGA TTTTTATTGC AGGTTTGCTG CTTATTTTAT CAAATGTTGG TTATAACATT
TCAGCACTTC TTGCAGGACT TGGTATCGGT GGTTTGGCAG TTGCGCTTGC TGCAAAAGAT
ACAATCGAAA ATTTAATTGC TGGATTTATT ATAATTGTTG ACAGGCCTTT TAAACTGGGC
GACTGGATAA ACTGGGGCGG AAAGGAGGGT ATTGTAGAAG AAGTTGGAAT CCGGAGTACG
CGGGTTCGTT CATTTGGAGA TACCATAATC ACTGTTCCAA ATGCAAACAT CGTCCAAACT
GAAATTGAAA ACTTCTCAGA ACGGAGAAAA AGACAGGTAA AAGCAACAAT TGGTTTAACT
TATGATACAC CTGTTGACAA AGTAAAACGT GCAAAAGAAA TAATAGAAAA CGTTTTAAAT
GATCATCACG GAGTTGTAGA TCCTATAAGG GTTTCATTCG TTGAATTTGG AAGTTTTTCA
CTTGATTTAA GGGTGGAATA CTTTGTAAGG GATTTCGGGT TTGATTTCTT CTTAAATACA
AAGGATGAAG TAAATATAAA AATCAAAGAA GAATTTGAAA AAGAGAATAT CGAATTTGCA
TTCCCTACGC AGACTGTATA CTACAAAAAA GAATAA
 
Protein sequence
MALDQLYFGN TLYSYMIFLI FIFFGIFFGK VMYIFLNKYV RVLAGKTKTK LDDVVLDAVE 
IPLIIVVFVL FFKYGLKNLV LPDHLALWLN ESLTVALTFA GVLFLLKIVD DIIVNYVVPI
VEKSENKLDD QLVPLMRKLV KFLIFIAGLL LILSNVGYNI SALLAGLGIG GLAVALAAKD
TIENLIAGFI IIVDRPFKLG DWINWGGKEG IVEEVGIRST RVRSFGDTII TVPNANIVQT
EIENFSERRK RQVKATIGLT YDTPVDKVKR AKEIIENVLN DHHGVVDPIR VSFVEFGSFS
LDLRVEYFVR DFGFDFFLNT KDEVNIKIKE EFEKENIEFA FPTQTVYYKK E