Gene MmarC5_1407 details

Gene Information

• Locus tag: MmarC5_1407
• ID: 4927631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: -
• Start bp: 1349609
• End bp: 1350235
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640166903
• Product: high-affinity nickel-transporter
• Protein accession: YP_001097919
• Protein GI: 134046434
• COG category: [R] General function prediction only
• COG ID: [COG2215] ABC-type uncharacterized transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTTTA TTATATGTTT TTCAGCTTTT TTACTTGGTG CCATGCACGC ACTTGAACCG 
GGTCACGGAA AATCTATAAT GGCAGCTTAT GTGATTGGAA CAGATGCAAA TCTTAAAGAA 
TCACTTACCC TTGGTTTTAC AATCCTGTTT TCTCACGTAG TTATCATATT TCTCCTAGGA 
TTGTTTTCAA TCTATATGGT GGAATATTTT AACATTGGAT ATGTAACTAC AGTAATGGAA 
GTTCTTGGTG GAGTTATTCT TTTATTGGTT GGAGCATGGA TTGTTAAAAG CTATTATTTC 
CCTCATGAAC ACAGTATTGA CACGAATAAA AGTTCAATAG CTATTGGATT GTCTGCAGGT 
TTGGTTCCAT GTCCTGCAGC TCTTGCAGTA TTGTTATTTA GCATATCCAA CAATGCGATA 
TTTGATGGGT TTTATTATGT ATTAGTATTT AGCATAGGCC TTGCAGCGAG TATTGCGTTA 
TTTTCGATAC TATTTGTTAA AAGCAAAGAT TTTTTAGAAA AATACGTCAA AAACGAACAG 
ATAAACAAAC TGCCATTAAT TAGCGGGATA ATAATTATAT TATTTGGATT TTGGAATATT 
TCTGGTCCAC TACTAGGAAT TCATTAA 

 

Protein sequence

MEFIICFSAF LLGAMHALEP GHGKSIMAAY VIGTDANLKE SLTLGFTILF SHVVIIFLLG 
LFSIYMVEYF NIGYVTTVME VLGGVILLLV GAWIVKSYYF PHEHSIDTNK SSIAIGLSAG 
LVPCPAALAV LLFSISNNAI FDGFYYVLVF SIGLAASIAL FSILFVKSKD FLEKYVKNEQ 
INKLPLISGI IIILFGFWNI SGPLLGIH