| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1396 |
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| Symbol | |
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| ID | 4927878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1337868 |
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| End bp | 1339010 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640166892 |
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| Product | TraB family protein |
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| Protein accession | YP_001097908 |
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| Protein GI | 134046423 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATAA GGATTAACAA TGGCGTTACA GAATGTAACA TCAGATTGGT AGGAACTGCA
CACGTATCTG ATGATAGTAT TACTGAGGTA AAGAACGCTA TCGTCGAAAC AGATCCGGAA
TTAGTAGCTA TTGAATTAGA TAAAGACCGA TTTGTAGCCA TGTTTCAAAA CAAAAAAAAT
GACGTGGATT TAAAATCGGT CATAAAACAG GGCAAGGTTG GAATATACAT AGTGCACTCC
ATCTTAGCAA ACTTCCAGAA AAATATCGGG GAACAATTTG GGATAAAACC TGGAAGCGAA
ATGAAAAAAG CCACCGATCT TGCGATACAA TACCAAAAAC CAATTTCATT AATTGATAGA
CCGATAAACA TTACATTATC TAGAACAGTT AATAAAATGA CGTTTAAAGA AAAGTTTGAC
TTTGTAATTG GTCTTTTAAC TGAACAAAAC GTTGAATTGG ACGAAAAAGC AATTAATGAA
ATGGTATCAA ATGCTGATGA TTTAATTTTA CTTTTAAAAG ATATTTCTCC TTCAATTTAC
GAAACCCTTG TTAATGAAAG AGATAAATAT ATGGCAAAAA ATCTCTTTGA AGCAAGCAAA
GGAAAAGAAA ATATTGTTGC AGTAGTTGGC GCTGGGCACG TTCCAGGAAT TAAAAATTAC
CTCAAAAAAA TGGAATCTGG AGAAGACATT GACTTAAAAT CTTTAATGGA TGTAAAAAAA
AAGTCAAATA TTTTAGGTAA AGTAATTTCA ATTGCAATTC TATTAATAAT ATCATATGGA
TTTTGGACTG CATCATCAAA TCTCGAAGCA TTGAAAGCAT TAACCTTAGA ATGGGTCTTG
ATAAACGGCT GTCTTTCATC ACTTGGTGTT TTTGTAGCTC GTGGAAAAAT TCCAACAATT
ATTGCAGCGT TTTTAGCGGC CCCCATCACA TCATTAATCC CTGTAATCGG TGCAGGCTAT
GTTGCAGGCT TAGTTGAGCT TAAATTTAGG GATGTTTCTT TCAATGATAT TGGAGCAATG
CTGAATACTG AAAGTTTTAA AGAATTAATG GAAAATCAAG CTATGAGGGT TCTTTTAGTT
GCTGCACTTG CAAATCTTGG GAGCGTTATT GGAACTTTCT ATTTTATACC GAGATTTTTA
TAA
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| Protein sequence | MYIRINNGVT ECNIRLVGTA HVSDDSITEV KNAIVETDPE LVAIELDKDR FVAMFQNKKN
DVDLKSVIKQ GKVGIYIVHS ILANFQKNIG EQFGIKPGSE MKKATDLAIQ YQKPISLIDR
PINITLSRTV NKMTFKEKFD FVIGLLTEQN VELDEKAINE MVSNADDLIL LLKDISPSIY
ETLVNERDKY MAKNLFEASK GKENIVAVVG AGHVPGIKNY LKKMESGEDI DLKSLMDVKK
KSNILGKVIS IAILLIISYG FWTASSNLEA LKALTLEWVL INGCLSSLGV FVARGKIPTI
IAAFLAAPIT SLIPVIGAGY VAGLVELKFR DVSFNDIGAM LNTESFKELM ENQAMRVLLV
AALANLGSVI GTFYFIPRFL
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