| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1382 |
|---|
| Symbol | |
|---|
| ID | 4928537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1324375 |
|---|
| End bp | 1325718 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640166878 |
|---|
| Product | AIR synthase related protein |
|---|
| Protein accession | YP_001097894 |
|---|
| Protein GI | 134046409 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1973] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCG AAAGGTACGT AAGAAAGTGT CTGAAAAAGG GAATTTCAGA GTCTAAAATC
ATTGAAGACG GTTTTAAAAA AGTAATCGAA GTTAAAGACA CTGATGAGGG ATGGGCAAGA
AGATTTGTCG AAGCAGTAGT CGAAGAAGTA AAGACAACTG AAAAATACCA TGAATCAGAA
GATAAAAATT TAAAATATTT ACTTGACTGC CCAGAATCCG GAATTACAAT GGGAAAAATG
GGTGTTGGAA GCCGAGGAGA AGGCGATTTT TTTGTTCACC GCGAAATTGC GAGAATTATT
GAAAGTACAA ATTTAGAAAC TGAAGTCGAC AGTACTGAAC AGGACGATGC AGGAGTTGTA
AAAGCAAATG CGGAACACGT TGTGGTTGCA GTTGATGGAA CACATTCAAG ATTAAGTGAT
TTTCCATTTA TTGCAGGATT TCACGTTGCA AGAGCTGCAT TAAGGGACGT TTACGTAATG
GGTGCAGATG CAGTCGCAGT TATAAGTGAC ATTCACCTTG CAGACGATGG AGATGTTTCA
AAAATATTTG ATTACACCGC AGGAATCTGT GCAGTTTCTG AAGCTGTAAA TGTGCCCCTT
GTTGCTGGAA GTACCTTAAG AGTTGGCGGT GACATGGTTT TAGGGGACAG GATGGTCAGT
GCTGTTGGTG CAATCGGAAT AATTGGAAAA GGGGAACCAA CTGCAAGGAA AAGAGCAGAA
GTTGGTGACG TAATTTTAAT GACTGAAGGA AGCGGTGGTG GAACAATTTC TACAACTGCG
CTTTACTATG GAATGTTTGA CGTTATAAAA GAAACGATCA ATGTTGATTT TTTAAAATCA
TGCAAAAATT TGATTGAAAA CGATCTTTTA AAACACATTC ACGTAATGAC TGACGTTACA
AATGGTGGAT TAAGGGGCGA TGCATTCGAG ATCACAAACA CCGCAAAAGT TTCACTTGAA
ATCTACAAGG AAAAAGTTAA TGAACTCGTA AACCCGAAAG TCTTGGAAAT GCTTCAAAAA
TTAAATATTG ATCCATTGGG TGTTTCAATT GACAGCCTTT TGATAATTGC TCCTGAAGAC
AAAGCTGGAG GAATAATGGA AAAAACTGGT GCTAAACAGA TTGGAGTTGT CAAAGAAGGA
GACGTTAGCT ATTTAATTGA CGAAAATGGC GAAAAAGAAC TTTTAATTCC AAAATTCAGA
GAAGCTGCAT ACACACCAGT TAAAAAAGTG GTTGGTGAGC AAAAACCTGA TAACTTTGAA
GAAATGAAAG AAAAAGTTAG AAAAACATGC GACATGGCAA TAGAAAAGAA AGATTTCATA
TTAAAAGAAA TGGTTAAGGA TTAA
|
|---|
| Protein sequence | MDIERYVRKC LKKGISESKI IEDGFKKVIE VKDTDEGWAR RFVEAVVEEV KTTEKYHESE
DKNLKYLLDC PESGITMGKM GVGSRGEGDF FVHREIARII ESTNLETEVD STEQDDAGVV
KANAEHVVVA VDGTHSRLSD FPFIAGFHVA RAALRDVYVM GADAVAVISD IHLADDGDVS
KIFDYTAGIC AVSEAVNVPL VAGSTLRVGG DMVLGDRMVS AVGAIGIIGK GEPTARKRAE
VGDVILMTEG SGGGTISTTA LYYGMFDVIK ETINVDFLKS CKNLIENDLL KHIHVMTDVT
NGGLRGDAFE ITNTAKVSLE IYKEKVNELV NPKVLEMLQK LNIDPLGVSI DSLLIIAPED
KAGGIMEKTG AKQIGVVKEG DVSYLIDENG EKELLIPKFR EAAYTPVKKV VGEQKPDNFE
EMKEKVRKTC DMAIEKKDFI LKEMVKD
|
|---|
| |