Gene MmarC5_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1379 
Symbol 
ID4928206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1322128 
End bp1323096 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content36% 
IMG OID640166875 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001097891 
Protein GI134046406 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGTG GGGGCGTAAT TGATTGTAAA ATTAAATGGG AGTTTTTGAT CGGAAACAGT 
ATCGATTCAA GTCCAATTCT TGCTAAAAAC GGTACCATAT ATGTGGGTTC GGGAGATAAA
AATCTTTATG CGATAAATCC TGACGGCTCA ATAAAATGGT CTTTTAAATC TGATGAAATA
ATCGAGTGTA AGCCATCTAT TGGAAAAGAT GGAACAATCT ATTTTGGTTC AGACAAAGTC
TATGCAATAA ACCCTGACGG AACCGAAAAA TGGAAATTTG GTACAAAAAA AGCAATAGCC
TCTGATTTTA CGATTTTTGA AGATATACTT TATGTAACCT CACTTGATGG TTACTTGTAT
GCAATAAACC CTGACGGAAC CGAAAAGTGG CGTTTTAAAA CCAATAAGGC AATATATGCA
ACACCAATAG TTTCAGAAGA TGGAACAATA TATGTTGGTT CAAATGACCA TTATTTATAT
GCAATAAACC CCGATGGAAC CGAAAAGTGG CGTTTTAAAA CAAAAGACGC GATAACTTCT
GCAATATCTA TTGGAAACAC TGGAACAATC TATTTTGGTT CAGACAAAGT CTATGCAATA
AACCCTGACG GAACCGAAAA ATGGAACTTC TATGCGGGTT ACTGGATTGT TACAAGGCCT
GCAATTTCAG AAGATGGAAC AATATATGTA ACCTCACTTG ATGGTTACCT GTATGCAATA
AACCCCGATG GAACCGAAAA GTGGCGTTTT AAAACAGAAA AACGTATTGA ATCTTCCCCA
GTAATTGGAA ACACTGGAAC AATCTATTTT GGTTCATATG ATGGTCATCT CTATGCAATA
AACCCCGATG GAACCGAAAA ATGGAACTTT GAGACCGGAA GTTGGATAAT ATCTACCCCA
ACGATAGATG AAAACGGAAC AATCTATTTT GGAACGAGAA ACGGAAAATT CTATGCATTA
TTTAATTAA
 
Protein sequence
MLRGGVIDCK IKWEFLIGNS IDSSPILAKN GTIYVGSGDK NLYAINPDGS IKWSFKSDEI 
IECKPSIGKD GTIYFGSDKV YAINPDGTEK WKFGTKKAIA SDFTIFEDIL YVTSLDGYLY
AINPDGTEKW RFKTNKAIYA TPIVSEDGTI YVGSNDHYLY AINPDGTEKW RFKTKDAITS
AISIGNTGTI YFGSDKVYAI NPDGTEKWNF YAGYWIVTRP AISEDGTIYV TSLDGYLYAI
NPDGTEKWRF KTEKRIESSP VIGNTGTIYF GSYDGHLYAI NPDGTEKWNF ETGSWIISTP
TIDENGTIYF GTRNGKFYAL FN