| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1354 |
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| Symbol | |
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| ID | 4928198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1301167 |
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| End bp | 1302018 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640166850 |
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| Product | shikimate kinase |
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| Protein accession | YP_001097866 |
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| Protein GI | 134046381 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.887861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATGTT CTGCAGTTTC CCTAGGCTCG GGAACAATAA TTAATGCAAT TGCAACGGGT
TTTGGCTCTG CATTTGGTGT TGATTTAAAA ATAAAAGCTG ATGTTGAGTT AGTTGATAAC
TGCAAAAAAA TTATAAATGG GATTTCAATA GATAATCCTA CTTTAAAACC AAGTCTTGTA
GAAAGATGCG TTAAAAACGT TTTAGACCAC TTCGAAGTTG ATTATTCTGC AAAAATTTCA
ACGAGTGGAG ATATTCCTAT AAAATCAGGG CTTAGTAGCA GTAGTGCTGC TTCAAATGCC
GCTGTTTTAG CTACAATCGG TGCTCTTGGT GAAAAAGTCG ATTCAGATTT GGTTTTAGAT
CTTGCAATAA AATCTTCTTT TGAAGAAAAA TTAACGATTA CCGGAGCGTA TGATGACGCT
ACTGCATCAT ATTTTGGAGG AATTACCGTA TGCAATAATA TGGAAAGAAA AATACTGAAA
AAAGATGAGT TTAAAGAAGA TATAAAAGTT ATTGTATTAA TGCCGGAATT TCAAAAGAAT
GTTGATGTAA ATAGAATGAA ATTGATTAAA GATTACGTAG AAATTGCTTT TGAAAAGTGC
ATGGAAGGAG ATTACTACAA AGCATTGTTT TTAAATGGAT TGCTCTATTC TTCTGCATTG
AATTTCCCGT CAAACATTTC TGTCGATGCT TTAGAAGCGG GTGCAATTAC TGCAGGGCTT
TCTGGAACAG GTCCATCATA CGTTGCCCTT TGCTACAGTG AAGATAAAAA AAACGTTGAA
AATGCACTTA AAAAATATGG AAACACAGTG ATTACTAAAC CAAGTACTAA TGGAGCGAGA
ATACTTTACT AA
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| Protein sequence | MRCSAVSLGS GTIINAIATG FGSAFGVDLK IKADVELVDN CKKIINGISI DNPTLKPSLV
ERCVKNVLDH FEVDYSAKIS TSGDIPIKSG LSSSSAASNA AVLATIGALG EKVDSDLVLD
LAIKSSFEEK LTITGAYDDA TASYFGGITV CNNMERKILK KDEFKEDIKV IVLMPEFQKN
VDVNRMKLIK DYVEIAFEKC MEGDYYKALF LNGLLYSSAL NFPSNISVDA LEAGAITAGL
SGTGPSYVAL CYSEDKKNVE NALKKYGNTV ITKPSTNGAR ILY
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