| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1346 |
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| Symbol | |
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| ID | 4927907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1290720 |
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| End bp | 1292237 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640166842 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001097858 |
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| Protein GI | 134046373 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase
[TIGR03327] AMP phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATTTT TAAACGCAAA ATTCATAGAC CTTGATCTAG GTGAAAATGC GGTAATTGTC
AACGAAGAGG ACTTAAAAGG AACTTCGTAC TATCCGCAAG ATAGGGTATT GATTGAGTCA
CACGCAGGTT CCGTCATTGG AAACATTTAT TCCACAAAAA CTATGGTTAA CAAAGGCGAA
GTTGGAATGC TTGTTAGTGA ACTTGCAGAA ATTTCCATTT CAGAAGGGGA AGAAGTAAAA
TTAAGACACG CAGAAAAACC TGAATCAATT CCATTTATAA AAAAGAAGAT GGATGGCCAG
GTTTTAAATC CGCATGAAAT AAGAACGATA ATTGATGAAA TTGTATCTAA AAAACTCTCA
AACATTGAAT TATCTGCTTT TGTTTCGTCT ACGTACATAA ATGGAATGAA TATGGATGAA
ATAAGCGAAA TGACCAAGAG AATCGCAGAA ACTGGGGACA TGATTGCTTG GGAAAAGAGT
TTAGTTGTGG ATATTCACAG CATTGGTGGA GTTCCTGGAA ATAAGTACGC CTTACTTTCA
ATCCCGATAC TTGCAGCAGC AGGAATTACT GTTCCAAAAA CGTCATCAAG AGCAATAACT
TCACCTGCTG GAACCGCAGA TGTAATGGAA GTGCTCACAA ATGTTGAATT GAAAGAAGAA
GAGATTAAAA GAATAGTAAA AACTACAAAT GGATGTCTTG CATGGGGTGG AGGCGTAAAT
CTAGCTCCTG CAGATGATAT AATTATAAAT GTAGAACGGC CGGTTTCAAT AGACCCTCAA
CCACAGCTTC TTGCAAGTGT TATGGCAAAA AAGATTGCAA CAGGAATTAA ATATACTGTA
ATTGATATTC CCGTTGGAAA AGGGGTAAAA ATTAAAAATG AAGCAGAAGG GGCAAAATTA
GCAAGGAAAT TTATTGAACT TGGGGAATCG CTCAATATTA AGGTGGAATG TGTGTTAACT
TACGGTGGGC AGCCACTTGG GAGGGCAATT GGACCTGCAC TCGAAGCAAG AGAAGCAATC
GAAGCACTTC AAGATCCAAA AAATGCTCCA AAAAGTTTAA TTGAAAAGGC ACTATCTCTT
GCAGGAATTC TTCTTGAACT CGGAGGGGCT GCACAGATTG GGGAAGGTCA AAATTTAGCA
TGGGAAATTT TAGAATCCGG AAAAGCACTT GAAAAATTTA ATCAGATTAT AACTGAACAG
GGTGGAACTC CGAAAAAACC CGAAGAAATA GAACTTGGAG ATTATGTTGA AGAAATTCTT
GCGCCAATTG ATGGGTATAT TACAGATATA AGTAACACTG CAATTACAAA CGTGGTTAAA
GAAGCTGGAG CTCCAAGGGA TAAAAAAGCA GGAATTTTAT TGAATTCAAA GATTGGAAAT
AAAGTAAAAC AGGGAGATGT TTTATATACA ATCTATTCCG GATCAGAAGA AAGGCTTGTT
TCAGCAATAA ATCTTGCAAG AAGAGTTTAT CCTGTAAAGG TTGAAGGAAT GCTTATTGAG
AGAATAAGCA AATTCTAA
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| Protein sequence | MLFLNAKFID LDLGENAVIV NEEDLKGTSY YPQDRVLIES HAGSVIGNIY STKTMVNKGE
VGMLVSELAE ISISEGEEVK LRHAEKPESI PFIKKKMDGQ VLNPHEIRTI IDEIVSKKLS
NIELSAFVSS TYINGMNMDE ISEMTKRIAE TGDMIAWEKS LVVDIHSIGG VPGNKYALLS
IPILAAAGIT VPKTSSRAIT SPAGTADVME VLTNVELKEE EIKRIVKTTN GCLAWGGGVN
LAPADDIIIN VERPVSIDPQ PQLLASVMAK KIATGIKYTV IDIPVGKGVK IKNEAEGAKL
ARKFIELGES LNIKVECVLT YGGQPLGRAI GPALEAREAI EALQDPKNAP KSLIEKALSL
AGILLELGGA AQIGEGQNLA WEILESGKAL EKFNQIITEQ GGTPKKPEEI ELGDYVEEIL
APIDGYITDI SNTAITNVVK EAGAPRDKKA GILLNSKIGN KVKQGDVLYT IYSGSEERLV
SAINLARRVY PVKVEGMLIE RISKF
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