| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1324 |
|---|
| Symbol | |
|---|
| ID | 4929172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1271987 |
|---|
| End bp | 1273288 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640166817 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001097836 |
|---|
| Protein GI | 134046351 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.419194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC ATGATTTTTT AATATACATT ACAGTATTGT TATTTATTGA AGGATACCTA
TTTACCAATA TATTGCCCTT GTCATTTGGA ATTATTATCT TATTCTATCT TTTTTTGGCA
ATGACTTCGT TTAATCCATT ATATGAGTAT GATATCATAG TTCCAGAAAT GGACGTTATT
GAAAATGAAA AAATAGTTAT TAACTTAAAG ATTAAAAATT TATCCACAAA TCCATTAAAC
TTTAAAATTA CTGAAAATAG TTCTGAATTT GAATGGAGTT CTAAAAAAAA AATGATTAAA
TCAGGCACAC TTTCTGAAAT AAAATTAGAA CTAAAACCAA TACATAAGGG ATGTTTTTTA
ATTAACGAAA TACCATTAAA AATTTCTGAT CAATTCGATA TTTTTGAAAA AGTATCTTTA
ATCAATACCT CGCTTACAAT TAATGTTTAT CCGTCAAATG AACGTATTTT AAACGGATTA
AATATGAACA AAAATATTAA ACTTGGAACT GAAATACTTA AATCACTTAA AATGGGACAT
AAAAGTTCTG AATTTGATTA TTTACGGGAT TATTTCCCAG GTGATGAATT TAAAAATATC
AATTGGAAAG CTTCTTTAAA ATTTGGTCGC CTGATATCAA AAGAGTTTTT AAAAGAAAAT
GAAGGAAATT TAACTATTTT AGTAGATGTA AGTCAGTCTT TTTTAAAAGA TTTTAAAGGG
GGGAATCTAA AAACCGATTA TGTAAGTATG ATTGTATTCC AAATTGCTTT TTATGCCTTA
AAAAACTACA AATTTGTAAA TATGGTATTT TTTGATGACT CGGGCATAGT AAAATTCGCG
CCAAATATCA CTTCAAAACA GTCTTTAAAA AAATATCTTA AAAATAGGTT GGTACCTTCT
GAAGGAACCC CGTATATTCA AAATTCTCCA GATCGATCTT CCGAAAAACC TACTTTTTTA
AGAATTTTAA AACCGATCTT GAAAAGATCG CCTGAAAAAT TTTTTCACGT TACCAAGTTA
ATAGATCCTA AAAGTACCCC CCTATTGATA ACCGATATTT CAAATATTAA ACAAATTTTA
ACACTCCATC ATGAAATCTG TAAAAAAAAT TCAAAAATGT ACATAATATC ACCCAATCCA
TTATTATTTG GTATCGATGA AATCTCTGAA AACCGCATCC CCATAATATA TAATCAATAT
ATTGAGAGAG AGAAAAATTT ATTTAAATTA AATAAATTAT GCCCTACAGT AGATGTTGGC
CCAAACGACC TTTTAAAAGA AATACTGGAG GAATTTAAAT GA
|
|---|
| Protein sequence | MKKHDFLIYI TVLLFIEGYL FTNILPLSFG IIILFYLFLA MTSFNPLYEY DIIVPEMDVI
ENEKIVINLK IKNLSTNPLN FKITENSSEF EWSSKKKMIK SGTLSEIKLE LKPIHKGCFL
INEIPLKISD QFDIFEKVSL INTSLTINVY PSNERILNGL NMNKNIKLGT EILKSLKMGH
KSSEFDYLRD YFPGDEFKNI NWKASLKFGR LISKEFLKEN EGNLTILVDV SQSFLKDFKG
GNLKTDYVSM IVFQIAFYAL KNYKFVNMVF FDDSGIVKFA PNITSKQSLK KYLKNRLVPS
EGTPYIQNSP DRSSEKPTFL RILKPILKRS PEKFFHVTKL IDPKSTPLLI TDISNIKQIL
TLHHEICKKN SKMYIISPNP LLFGIDEISE NRIPIIYNQY IEREKNLFKL NKLCPTVDVG
PNDLLKEILE EFK
|
|---|
| |