| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1321 |
|---|
| Symbol | |
|---|
| ID | 4929146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1268240 |
|---|
| End bp | 1270072 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 640166814 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001097833 |
|---|
| Protein GI | 134046348 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGT ATAAACCAAG AATATTATTA CTTATATTTA TAATCTATTT TTTTTCAACA
GTTAGTGCAG CAAATATAAC AGATGAACAA TTTGAGTCAG ATGACACATA CATTTACACA
TATTTTAATA ATTTTTTGAT GGATTATACA AATTCTATCG ATAAAATGAT TGTTGATGAT
ATTACATATA TAAACGACTC AGAATTTCTT TATGAAAAAA TCAATTACAT GGCTAAAGAA
GTTATAACTT ACGAATACAA TTCGATAAAT AGTCCTGCAG GGGATGTAAT CGACCCGTAC
TACAGTTTTT CCAAGGATTT AAATGAATTA AGCATATTAA ACAAAGAATT TAATGAACAA
CTTGAAAATA ATACATTAAA TAGCAAATAT TCTGCAAAAA TAACTGTAGT AAAGATATTA
TCGAAAATAG GCACAATGAG ATCTACGTTA GATACAATAG ACAATATCAC AACACTTCAA
ATAGACAACC GAATTTTAAC ATTTGATACT TCAGAAGTTA GAAAAAGTCT TGATTATTAT
GAATTAAAAA TATTAAAAAA AGCAGAACTT CTAGAAGACT TGAAACCTAA CGAAAATTTA
ACGTTATTTA TTTCACCAGA AGTGCCGATA ATTTACGAAG ATACATTAAT TTATGGAACT
GGTAAAAATG GAAATGCCAA AATCGTAATA ATCGGTCCTG AAAACATTGT TTATAATATT
ACGATAAATG AGAACAATTA TCTTAAAAAC CATGTTTTTG AGAAACCAGG AATATACAGA
CTTTATGCAG TTCAAGATGG GAAACGATCT GAAGTAGTTA TAGCAAACGT TTCGAAAATA
CCTACGCAGA TTATTATGGA AGGCCACTAT ATGATAGATA TATTTCAAAA TAAAAGTATT
GGAGGTACCG TTGTTGATTT TCACGAAAAT CCTGTTGATT CTGGGCATAT AGTATTTGAA
AACGAAACTT TGGAATTAAC TAACGGAATG TTCAAAAAAA ATATTTATTC TGAAGTTGTA
TCCTCTGAAA AATATATTAT TAAATTCCTA GAAACTGAAA AATATCTTCC ATCTGAAAAA
ATTATTGAAG TAATTTTTTC CAAAAAACCA GTTGCTATTA GAATATATTC TGAAACTCCC
GAAACAAAAA TAAATAGCCC CATAACAATT TTTGGAGAAT ACTATGGACT TGATGATAGT
TTAGAGCTAA AATTATGGTT AAATGGAAAA TTAAACAGTA CTTTTAAATC AGACTCCACT
TTTGAAAAAG AACTCGTATT CGATAAATCT GGAACTTATG AGATATATGT AACATATGAT
GGAAATGAAC AGTACAGTTT TTCGAAATCA AATACGATTA AAATAAAAGT AACTGAAAAA
TCAATGCCAT TAATTTCGAA CACTAAAAAA CCATTTATTT TGTTATTTTT AGTTATCATT
GGATTAATAA TTGCGATTTA CAAAAAAATG AAAAAAAATG AAAAAGTTGA TTTGAAAGAA
TTATCCTCTG AAAAAGAAAC CTGTCTAACT TTTGAGGATT CTGAAACCCC CTATACGGAT
ACTTTAGAAA TTCCTACTTC AAAAATAGAA ACCAGCATTT CTTCAAAGTA TATGGAACTA
TACAATAAAA TAATTTCAAA ATATGAAATA AGATCAAAAC TTACTCCAAG AGAACTATTA
AATTATATAA AAGAAAACAA CTACCCCCTA TACGATGAGT TAAAATTCAT TACGGAAATA
CATGAAAAAC ATAATTATGA AAAATCCAAA ATCGATAGAA ATACTGAAAA AGGATATTAT
AAATCAGTCG ATAATCTTTT GGAGATGCTA TAA
|
|---|
| Protein sequence | MNSYKPRILL LIFIIYFFST VSAANITDEQ FESDDTYIYT YFNNFLMDYT NSIDKMIVDD
ITYINDSEFL YEKINYMAKE VITYEYNSIN SPAGDVIDPY YSFSKDLNEL SILNKEFNEQ
LENNTLNSKY SAKITVVKIL SKIGTMRSTL DTIDNITTLQ IDNRILTFDT SEVRKSLDYY
ELKILKKAEL LEDLKPNENL TLFISPEVPI IYEDTLIYGT GKNGNAKIVI IGPENIVYNI
TINENNYLKN HVFEKPGIYR LYAVQDGKRS EVVIANVSKI PTQIIMEGHY MIDIFQNKSI
GGTVVDFHEN PVDSGHIVFE NETLELTNGM FKKNIYSEVV SSEKYIIKFL ETEKYLPSEK
IIEVIFSKKP VAIRIYSETP ETKINSPITI FGEYYGLDDS LELKLWLNGK LNSTFKSDST
FEKELVFDKS GTYEIYVTYD GNEQYSFSKS NTIKIKVTEK SMPLISNTKK PFILLFLVII
GLIIAIYKKM KKNEKVDLKE LSSEKETCLT FEDSETPYTD TLEIPTSKIE TSISSKYMEL
YNKIISKYEI RSKLTPRELL NYIKENNYPL YDELKFITEI HEKHNYEKSK IDRNTEKGYY
KSVDNLLEML
|
|---|
| |