Gene MmarC5_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1316 
Symbol 
ID4929224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand- 
Start bp1262489 
End bp1263052 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content32% 
IMG OID640166809 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001097828 
Protein GI134046343 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCATTTA TATTTAAAAA TTTAAAAATT CCCGAAGTAA TTTTAATTGA ACCAAAAGTT 
TTTCCTGACG AAAGAGGATT TTTTCTAGAA ACGTATAAAT TCAGCGACTT TTTTGATGCA 
GGCATAACTG AAAATTTTGT TCAAGATAAT CATTCAAAAT CAAAATATGG GGTTTTAAGG 
GGCCTACATT TTCAGAATGA TCCTAAAGCG CAGGGAAAAC TTGTACGGTG TATAAAAGGC 
GAAATTTTTG ACGTTGCAGT TGATTTACGA AGAAATTCTC CAAAATATGG AAAATGGGTT 
GGGGAAATTC TTTCAGAAGA AAACAAAAAA ATGTTATATA TTCCAAATGG ATTCGCACAC 
GGTTTTTGTG TTTTAAGTTC AGAAGCAGAA ATAATTTACA AATGCACTGA AGAATACGTT 
CCAGGATGCG ATGCAGGAAT ACTTTGGAAT GATGAAACAA TTGGAATTGA TTGGCCAGTA 
GTGGATCCAA TAATTTCAGA AAAAGATTCT TTGTTACCAA ATTTGGTAGA TTCAAATGTA 
AATTTCAGGT ATGGTGAAGA ATAA
 
Protein sequence
MPFIFKNLKI PEVILIEPKV FPDERGFFLE TYKFSDFFDA GITENFVQDN HSKSKYGVLR 
GLHFQNDPKA QGKLVRCIKG EIFDVAVDLR RNSPKYGKWV GEILSEENKK MLYIPNGFAH 
GFCVLSSEAE IIYKCTEEYV PGCDAGILWN DETIGIDWPV VDPIISEKDS LLPNLVDSNV 
NFRYGEE