Gene MmarC5_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1301 
Symbol 
ID4929252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1247109 
End bp1247639 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content33% 
IMG OID640166794 
Producthypothetical protein 
Protein accessionYP_001097813 
Protein GI134046328 
COG category[R] General function prediction only 
COG ID[COG1439] Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA TACTCGATGC TTCAGCGTTT ATCCACGGAT ACAACCCCTC AATCGAAGAA 
GGAGAGCACT ACACTACAAA CGGAATCGTT TCAGAAGTCG TTTCAAAAGA AGATATTGTA
AAATTGGCAA TCGAATACGG AAAATTAAAA ATACTCAACC CAAAACCTGA AACCATTGAA
AATGTAGTGA AAACTTCGAT AGAAACTGGA GACACTATTT CAAACAACGA CATCGAAATA
CTCGCGCTTG CAATCGACCT TGGCGGAATT TTGTATACTG ACGATTATGG ACTTCAAAAT
GTTTCGAAAA AATTAAAAAT AAAATATGAA AATATCGTTG CAGCAGGGTC AAAGGACGAT
TTCGTCTGGA AAAAAATCTG CAAAGGTTGT AAAAAGATGT ATCCAATAAA TTACCTTGAT
GATGAATGCG AAGTCTGTGG AAGCCCACTT TATCGAAAAA TGGTAAAAAA TAGACTTAAA
AAAGGTAAAA AATTTTATGA TAAAAAGAAA AAACCAAAAA AATTATTTTG A
 
Protein sequence
MIKILDASAF IHGYNPSIEE GEHYTTNGIV SEVVSKEDIV KLAIEYGKLK ILNPKPETIE 
NVVKTSIETG DTISNNDIEI LALAIDLGGI LYTDDYGLQN VSKKLKIKYE NIVAAGSKDD
FVWKKICKGC KKMYPINYLD DECEVCGSPL YRKMVKNRLK KGKKFYDKKK KPKKLF