| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1241 |
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| Symbol | alaS |
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| ID | 4929066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1184547 |
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| End bp | 1187225 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640166732 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001097753 |
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| Protein GI | 134046268 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.243126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATTA ATCACGATTA TAGAGTAAAA CTTTTTGATG AATTAGGTTT TGAAAGAAAA
CAGTGTACGG AATGTAACCA ATGGTTTTGG ACACTCGATA AAGACAGGAC TACGTGTGGA
GACAGTCCTT GTGACGAGTA TTCATTTATT GGAAGCCCAA TAACCAGTAA AAAGTATACT
TACAACGAAA TGGTAAAGGA ATTTACAAAC TTCTTTGCTG AAAAGGGGCA CAGCCCTGTA
AAAAGATCTC CCGTAGTTGC AAAAAGATGG AGAGACGATA TTCTTTTAAC TATTGCATCA
ATTGCAGTAT TTCAGCCATG GGTTACAAGT GGACTCGTAA AACCTGTAAA AAATCCGTTA
GTAATTGCAC AGCCATGCAT TAGGCTTAAC GATATTGATA ATGTTGGAAG AACTGGAAGA
CACTTAACCT GCTTTACAAT GGGTGCACAC CACGCATTCA ACTCAAAAGA CGAGTACAAG
TACTGGACAG ATAAAACTGT TGAATACTGT TTTGAATTAA TGAAAAGACT TGGAATCGAT
GAAAAAACGG TTACATTTAT CGAAAGCTGG TGGGAAGGCG GAGGAAACGC TGGACCTTGT
TACGAAGTAA TAACACATGG TGTTGAACTT GCAACACTTG TTTTCATGCA GTACAAAAAA
GTTGGAAACG ATTACGAAGA AATTCCTTTG AAAATTGTTG ATACGGGATA CGGAATCGAA
AGATTTGCAT GGGCTTCACA AGGAACTCCA ACAGTTTACG AATCTTTATT TTCAGAAGTA
ATTGAAAAAT TAAAGAAAGA TGCAGGAATT CCTGAAGTTG ACGAAAAAAT AATGGCCGAA
AGTGCAACTC TTGCTGGATT AATGGACATT GAAAATGTCG GTGATTTAAG AGTTTTAAGG
CAAAAAGTTG CTGAAAAAAT CGGAATGGAT GTAGATGAGC TTGATAAATT AATAAGCCCG
CTTGAATACA TCTACGCGAT TGCTGATCAC ACTAGATGTC TTTCGTTCAT GTTTGGGGAT
GGAATTGTAC CTTCAAATGT AAAAGAAGGA TACCTTGCAA GACTCGTTCT AAGAAAGACA
TTAAGATACA TGGAAAAAAT CGGAATCTCA ATGTCTATCA AAGATATAAT TGCAATGCAG
CTTGAAAACA TGAAGGAAAT TTATCCTGAA TTGAGTGAAA TGAAAGAATA CATCATGGAT
GTTTTGGATT CTGAAGAGAA AAAATACATT CAAACTGTGA ACCGTGGAAG GGGAATCGTT
GAAAGAATGG CTGTTTCAAA GTCTGAAATT ACTCTTGACG ATTTAATTGA ATTATATGAC
AGTAATGGAA TTCCTCCCGA AATTGTAAAG GATGTAGTCG ACGAAATAAA TAAAAAAGGA
AAGAAAACCA TCGCAATTAC GGTTCCAGAT AATTTCTACA CGATTGTTGC AGAAAGACAC
GAGGAAGAAA AACCTGAAGA AGTAGTTTCA ACGAAAAAAG AACTTCCAGA ACTTGAAGTT
TCCGAAACTG AACTTTTATT CTTCAAACAT CCAACACAAG TCGAATTTGA AGCTAAAGTC
TTGAAAACAG TTGAAAAATA CGTTTTACTT GACAAAACAC TCTTCTACGC TGAAGGTGGA
GGTCAAAAGT ACGATATTGG TCAATTAAAT GGAATAGAAG TTTCAGATGT CCAGAAAAAG
AATGGAATCG TATTCCACAA GGTTTCAGAT ATTTCAAAAT TCAAAGAAGG CGACACTGTA
AAAGGTACGC TAAACTGGGA AAATAGGCTT AAATTGATGA GAAACCACAC TGCAACGCAC
GTAATAAATG CGGCAGCAAC AAGAGTTCTT GGAAAACACA TATGGCAGAC TGGTTCAAAC
GTTGATACCG AAAAAGGAAG ACTTGATATA ACTCACTACG AGAGAATTTC AAGAGAACAG
GTAAAAGAAA TCGAAAGAAT TGCAAATGAA ATTGTTCTTT CAAAAATGCC TGTAAATTCC
ACATTTATGG ATAGAAACGA TTCAGAACAA AAATATGGCT TTACAATCTA CCAGGGCGGT
GTAGTTCCGG GAGATACTTT AAGAATAATT GAAATCGAAG GAACTGACGT TGAAGCATGT
GGTGGAACTC ACTGTAGCAA CACTTCAGAA GTTGGATACA TTAAAGTTTT AAAGACCGAA
AGAATTCAAG ATGGTGTTGA AAGACTTGAA TATTCAACAG GAATGGGTTC AGTTTCGGAA
ATTGCAGTTC TTGAGGATAT TTTAATCGAT TCTGCTGAAA TTTTGGGAAT TCCAAATGAC
CAGCTTCCAA AAACTGTTAA AAGATTCTTT GAAGAATGGA AAGAACAGAA AAAAACGATT
GAAGAACTCC AGAAAAAAGT CGGTGAACTT GTTAAATATG AACTTGCCGA TAAATTCGAA
AAACACGGAG ATTATGAAGT TTTAGTTGAA CAAGTCAGCG GAACTCCAAA CGAGTTGATG
TCAATTGCAG ACAACCTTGC AATTGGGAAT AAACTCATAG TTTTAATGAA TGAAAACGAC
TACCTCTTAT GTAAAAGAGG AGAAAACGTT GAATTAAGCA TGAAAGAATT AATCAGAAAT
ATTGGAAAAG GTGGGGGTAA AGATAACCTC GCACAAGGAA AATATTCTGA AACAAAGGAA
CAAATCACGG AAAAAATAAG CCAGATTTTA AATAAATAA
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| Protein sequence | MEINHDYRVK LFDELGFERK QCTECNQWFW TLDKDRTTCG DSPCDEYSFI GSPITSKKYT
YNEMVKEFTN FFAEKGHSPV KRSPVVAKRW RDDILLTIAS IAVFQPWVTS GLVKPVKNPL
VIAQPCIRLN DIDNVGRTGR HLTCFTMGAH HAFNSKDEYK YWTDKTVEYC FELMKRLGID
EKTVTFIESW WEGGGNAGPC YEVITHGVEL ATLVFMQYKK VGNDYEEIPL KIVDTGYGIE
RFAWASQGTP TVYESLFSEV IEKLKKDAGI PEVDEKIMAE SATLAGLMDI ENVGDLRVLR
QKVAEKIGMD VDELDKLISP LEYIYAIADH TRCLSFMFGD GIVPSNVKEG YLARLVLRKT
LRYMEKIGIS MSIKDIIAMQ LENMKEIYPE LSEMKEYIMD VLDSEEKKYI QTVNRGRGIV
ERMAVSKSEI TLDDLIELYD SNGIPPEIVK DVVDEINKKG KKTIAITVPD NFYTIVAERH
EEEKPEEVVS TKKELPELEV SETELLFFKH PTQVEFEAKV LKTVEKYVLL DKTLFYAEGG
GQKYDIGQLN GIEVSDVQKK NGIVFHKVSD ISKFKEGDTV KGTLNWENRL KLMRNHTATH
VINAAATRVL GKHIWQTGSN VDTEKGRLDI THYERISREQ VKEIERIANE IVLSKMPVNS
TFMDRNDSEQ KYGFTIYQGG VVPGDTLRII EIEGTDVEAC GGTHCSNTSE VGYIKVLKTE
RIQDGVERLE YSTGMGSVSE IAVLEDILID SAEILGIPND QLPKTVKRFF EEWKEQKKTI
EELQKKVGEL VKYELADKFE KHGDYEVLVE QVSGTPNELM SIADNLAIGN KLIVLMNEND
YLLCKRGENV ELSMKELIRN IGKGGGKDNL AQGKYSETKE QITEKISQIL NK
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