Gene MmarC5_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1239 
Symbol 
ID4929062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1182762 
End bp1183619 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content36% 
IMG OID640166730 
Productheat shock protein HtpX 
Protein accessionYP_001097751 
Protein GI134046266 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCTA CAGTAAAAGT TCTTTTATTG ATGGCACTTT TAACAGGAAT GATTTACGGA 
ATTTGTTATA TGCTTGGGTT CCCCCCGATA TTTGCAATAC TTTTAGCACT AATTCCAAAT
TTAATAAGCT ATTTTTATAG CGATAAAATA GTTCTAAAGA GCTATGGTGC AAAAATGGTG
GAAGAAAGTG AGGCACCAAA TTTACACAGA ATTGTCGAAT CAATAGCAAA CAGGGCAAAT
ATTCAAAAAC CAAAAGTTGC AATAATTAAT ACTGATACTC CAAATGCATT TGCAACAGGA
AGAAGTCCTA AAAATGGGGT AGTTGCAGTT ACTACAGGAA TACTACAACT TTTAAATGAG
CAAGAACTCG AAGGGGTTTT AGCACACGAA GTTGGACACA TAAAGCACAG GGACATATTA
ATTGGAACGA TAGTTGCAAC AATGGCTGGA GCAATAATGT ATATTGCAAA TTTCTTACAA
TGGGGCATGT TATTTGGATA TGGAAGAGAT GACGATGGAA ATCCAATGCA GCTTGTTGCA
TCATTGCTTT TCATAATCCT GGCTCCAATT GCAGCAATGG TTATTCAATT TGCAGTTTCA
AGGCAAAACG AATTTACTGC TGACGAAAGC GGTGCAAGAT ATTCAAACCC AATTTATCTT
GCAAATGCAC TCACAAAACT TGAAAAAGGG GTTAAATACC ATCCTTTAAA AAATGGAAGC
CCTGCAACTG CGCACATGTT TATTGTAAAT CCTTTTAAAG CAGGAAACGT TGCAAGATTA
TTTTCAACGC ACCCTTCAAC AGAAGAACGG GTAAAAAGAT TGATGGAAAT GGCAAGTAAT
CCTAAATATT TAAGATAA
 
Protein sequence
MMSTVKVLLL MALLTGMIYG ICYMLGFPPI FAILLALIPN LISYFYSDKI VLKSYGAKMV 
EESEAPNLHR IVESIANRAN IQKPKVAIIN TDTPNAFATG RSPKNGVVAV TTGILQLLNE
QELEGVLAHE VGHIKHRDIL IGTIVATMAG AIMYIANFLQ WGMLFGYGRD DDGNPMQLVA
SLLFIILAPI AAMVIQFAVS RQNEFTADES GARYSNPIYL ANALTKLEKG VKYHPLKNGS
PATAHMFIVN PFKAGNVARL FSTHPSTEER VKRLMEMASN PKYLR