| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1226 |
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| Symbol | |
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| ID | 4929022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1170162 |
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| End bp | 1171439 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640166717 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001097738 |
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| Protein GI | 134046253 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.33603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATTT ACATTGAAGG ATATGGCTGC ACTTTGAACA CTGCAGACAC GGAAATAATA
AAAAATTCAG TTAATGAATT TGAAGATTTT GAATTGACCG ATAATGTGGA CGATTCCGAC
ATAATTGTCA TAAATACCTG TATTGTCAGG CAGGAAACCG AACACAGAAT GATTTCACGA
ATAGAATATT TCAAATCATT GGATAAAAAA GTTGTCGTAG CAGGATGCAT GGCAAAGGCA
CTACCTAAAA AGATTAAAAC TCTTGCAGAT GTTCTGGTAA TGCCAAGAGA AGCACAGTAT
TCTGGAAAAA TTCTGAAAGA TAACCTTTTA AAAGGATGCT CTGAAAAAAA TGGAAAATCT
AATGAAAATT TAAATTTTGA AGATCAATTA AATGAAAAAA TCAAAAAAGT AAGTTCACAA
GGTTTAATTA CTGCACTTCC AATATGCGAA GGATGCCTTG GAAGCTGTAC TTACTGTATT
GTAAAACGTG CAAGGGGAAA TTTAGCGTCA TACGATCGAG ATTTAATTGT TAAAAAGGCA
GAAGAACTTG TAAAAACAGG TACGAAATGT TTACTTGTAA CGGCTCAAGA TACAGCATGC
TATGGACTTG ATAATAACGA CAGCCTTCCA AATTTAATAA ATGATATTTC AGAAATTCCT
GAAAAATTTG CAATGAGAAT TGGAATGATG CACGCAAAAT TTGCAGAACC GATACTTGAT
GAATTAATTG AATCATTTAA ATCCAAAAAG GTTGTAAAAT TCCTTCATCT TCCAATTCAA
AGTGGTGACG ACCAGGTTTT AAAAGATATG AATAGAAACT ACACGGTTGA CGAATATATT
TCTGTATTAA ATGAATTTAA GTCAAAAATT AAGAATTTAA ACTTTACAAC TGATGTAATC
GTTGGATTCC CAACTGAAAC TGAAGAAGCA TTTGAAAATA CCCTTGAAAT TGTAAAAAAG
ATAAAACCTG ATTTTACTCA CGCTGCAAAA TATTCACAGA GGAAATACAC AAAAGCAGCA
ATTTTAAAAC AGGTCGATAC AAAAATAAGG AAAGAAAGGT CTGAAATTTT AAATGAACTC
CGGCGAGAGT TAAGCTACGA AAATAATACG CGACATATTG GTGAAACTTT CGAAATACTT
GTAACTAAAA GTAATATGGG AGTTACTGAC AATTGCAAAA ACGTGATTTT CGAAGAACCT
GCAAAAATTG GTGAATTTAG GCGAGTTAAA GTGACTGGTG CGAAGACTTT CGGACTTTCG
GGTAAACTGC TAAATTAA
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| Protein sequence | MKIYIEGYGC TLNTADTEII KNSVNEFEDF ELTDNVDDSD IIVINTCIVR QETEHRMISR
IEYFKSLDKK VVVAGCMAKA LPKKIKTLAD VLVMPREAQY SGKILKDNLL KGCSEKNGKS
NENLNFEDQL NEKIKKVSSQ GLITALPICE GCLGSCTYCI VKRARGNLAS YDRDLIVKKA
EELVKTGTKC LLVTAQDTAC YGLDNNDSLP NLINDISEIP EKFAMRIGMM HAKFAEPILD
ELIESFKSKK VVKFLHLPIQ SGDDQVLKDM NRNYTVDEYI SVLNEFKSKI KNLNFTTDVI
VGFPTETEEA FENTLEIVKK IKPDFTHAAK YSQRKYTKAA ILKQVDTKIR KERSEILNEL
RRELSYENNT RHIGETFEIL VTKSNMGVTD NCKNVIFEEP AKIGEFRRVK VTGAKTFGLS
GKLLN
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