| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1210 |
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| Symbol | rfc |
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| ID | 4928951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1153663 |
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| End bp | 1154610 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640166701 |
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| Product | replication factor C small subunit |
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| Protein accession | YP_001097722 |
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| Protein GI | 134046237 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGAAAC CATGGGTTGA AAAATACAGG CCAGAAACAC TTCCTGAAGT CGTTGGACAC
CACGAAATTA TCAAAAGACT TACAAATTAT GTTGAAAAAA AGTCAATGCC CCACTTACTC
TTTAGTGGTT CTCCAGGAGT TGGAAAAACA ACTGCAGCAC TTGCTCTTGC AAAAGATTTA
TACGGGGAAA CTTGGAGAGA AAATTTCCTT GAATTAAACA GTTCTGATGA AAGGGGAATC
GATGTAATCA GAACCAAAGT AAAAGACTTT GCAAGAACAA AACCTATTGG GGATGCCCCA
TTTAAAGTCA TATTTTTAGA TGAAAGTGAT GCTTTAACGT CAGATGCTCA AAACGCACTT
AGAAGAACCA TGGAAAAATA TTCTGATATT TGCAGGTTTA TTTTAAGCTG TAATTATCCA
AGTAAGATTA TTCCTCCAAT TCAATCAAGA TGTGCAATTT TTAGATTTTC ACCGTTAAAA
ACTGAAGATT TAGTTGAAAA TTTAAAAGAT ATTTCTGAAA AAGAAACATT AACTCTTGAA
AAAGGAGGAA TTGATGCGAT AATCTATGTT TCAGAAGGGG ACATGAGAAA AGCAATCAAT
GTTTTACAGA CTGCAGCAGC AGTTTCCGAT ACCGTAACTG AAGAAATAGT TTACAAAGTT
GCTTCTAAAG CGAGACCTGA CGAAATCAAA AAAATGACTC ATCTTGCATT GAATGGAAAA
TTCGTTGAAG CAAAAGAACA GCTCTATAAC TTGATGATTG ACTGGGGAAT GAGTGGAGAA
GATATATTAA TTCAAGTATT TAGGGAAGTT CCAAATTTAG ACATTTCTGA AAAAGAAAAG
GTGCATTTAG TCGAAGCAAT TGGTGAATGC GACTTTAGAA TCGTTGAAGG CTCAAACGAA
AGAATACAGT TAAGCGCACT CCTTGCAAAA ATGGGAATTT TAGAATAA
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| Protein sequence | MQKPWVEKYR PETLPEVVGH HEIIKRLTNY VEKKSMPHLL FSGSPGVGKT TAALALAKDL
YGETWRENFL ELNSSDERGI DVIRTKVKDF ARTKPIGDAP FKVIFLDESD ALTSDAQNAL
RRTMEKYSDI CRFILSCNYP SKIIPPIQSR CAIFRFSPLK TEDLVENLKD ISEKETLTLE
KGGIDAIIYV SEGDMRKAIN VLQTAAAVSD TVTEEIVYKV ASKARPDEIK KMTHLALNGK
FVEAKEQLYN LMIDWGMSGE DILIQVFREV PNLDISEKEK VHLVEAIGEC DFRIVEGSNE
RIQLSALLAK MGILE
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