| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1185 |
|---|
| Symbol | |
|---|
| ID | 4928825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1136465 |
|---|
| End bp | 1137481 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640166676 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_001097697 |
|---|
| Protein GI | 134046212 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0517] FOG: CBS domain
[COG1994] Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAATCGT TTAAAATAGC GCGTGTAATG GGGATACCTA TTGAACTGCA CATTACATTT
ATTCTACTGT TAGTAGTTGT TTTCTACTTT TGGGGCATTG AAGGGCTAAT TTTGTACATG
TTTTTGTTTA CATCCGTGGT TTTACACGAA CTCGGACATT CATACGTTGC AAAAAAATAC
GGGGTAACAA TAGAAAAAAT ACTGCTTCTG CCAATTGGCG GAATGGCGAT GATGAGCGAA
ATTTCAAAAG AAGGGGAATT TAAAATCGCA ATTGCAGGAC CATTGGTCAG TTTAGTACTT
GGAAGCATAC TGCTTGGAGT TTCAACAGTA ACAGATTATA CTTTAGCAGA ATATCCACTT
TTCCAGACCG TTGGGGGATT AAATATACTT CTTGGGATTT TTAACCTGCT TCCAGCATTT
CCAATGGATG GAGGGAGGGT ATTTAGGGCA TTGCTTTCAA AAATGACCAA AATGAGCTAT
GTAAAAGCAA CAAAACTTGC ATCAACAATC GGACAGTATT TTGCACTGCT TTTATTGATA
TTTGGACTCA TAAATTTCAA TGTAATTTTG GTATTGATTG CAATATTCAT CTACTTTGGA
GCATCTCAAG AGTACAAGGC ACTTGTTGCG GATACATTAT TTGAAAACGT GCCTGCAAAA
GAAATAATGT CTAAAAATAT AGTTTACGTA AATTCAGACG ATACTGTCGA TGATGTTTTA
AATCTAATGC TTGAAAATAG GTTTTTGGGG TATCCTGTAC TCGAGGATGG AAAAATCGTT
GGAACAATTA CTCTAAACGA AATATCTTCA TCTGCCGCAA AAACAACGAA AGTAAGAGAT
TTAATGTCTC CACCAGTAAT GGTTCCGCCA AATGCTGAAT TAAATGAACT AATTCGGGGA
ATGGCAAACA CAGACCGTGT TTATGTTATT GATAATGGAA ACATACTTGG AATAATTTCT
AAAACAGATA TAGTAAGAAC TTTAAGTATT CTCGGGCTAA AAAATAACAA CCAATAA
|
|---|
| Protein sequence | MQSFKIARVM GIPIELHITF ILLLVVVFYF WGIEGLILYM FLFTSVVLHE LGHSYVAKKY
GVTIEKILLL PIGGMAMMSE ISKEGEFKIA IAGPLVSLVL GSILLGVSTV TDYTLAEYPL
FQTVGGLNIL LGIFNLLPAF PMDGGRVFRA LLSKMTKMSY VKATKLASTI GQYFALLLLI
FGLINFNVIL VLIAIFIYFG ASQEYKALVA DTLFENVPAK EIMSKNIVYV NSDDTVDDVL
NLMLENRFLG YPVLEDGKIV GTITLNEISS SAAKTTKVRD LMSPPVMVPP NAELNELIRG
MANTDRVYVI DNGNILGIIS KTDIVRTLSI LGLKNNNQ
|
|---|
| |