| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1179 |
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| Symbol | |
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| ID | 4928765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1127938 |
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| End bp | 1129134 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640166669 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001097691 |
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| Protein GI | 134046206 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0294292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTCTG ACTTTGAAAA AGAAGACGTT TTAGAAGATA TTACCTCAAA TAATGCTGAT
CAAAAAAGTA AAAAAAAGGT AAACGGAAAA AAACAGAAAC CAGTCACCAT TTCAGAATTT
GAAAAAGATC TTTTTGAATC CCGAGGAATC GGCGATTCAA ACATTATTGG AGAAAATAAT
TCGGAAAATG AAGAAAAAAC GTTATCAGAT CAAGAGTATA TCGAAAAATG GAAAAATTTA
TACGCAGAAA AAAGGAAAGG GGCAGTAGCA CAAAGTACTT TAATAAATGA ACTTTCAAAA
CTGCCTGTTT TTTTTAGATA CACTATAAAA ATTGGTAAAA AACCTGATGA AATGACTAAA
AATGATTTTA TTAAATTTTT TGATTATTTG CAAAACACTA AAAAACCGCA TGATAATCGA
AATAAAAAAA ATAATTCGAA AAAGGTTTCC AAACCCTTAT CGAGAAATAC AATCTGGAAA
TACTACTTAC TTCTAAAAAC ATTCTACTTA TTACTCGAAT TGGATAATTT TGATGAGTTT
AGCGAGTACA ATGCGAAAAT CCCCCGACTA AAAAAACCAA CGAAAAGTGA TCATTACGAT
CCACTTTTAA AAGAACATTT TGATGAGATT ATTCGAAGAA TAATAAGAAG TACAAGTAGA
ACTCGTGTAA GAGACGTACT TGCACTAATG CTTTTATGGG ATTCGGGAGC AAGAGTTTCA
GAAGTTCTAA ATTTAACATA CAAAGATTGT GATTTTAAAA CGGGACGTTT TAAATTTTTT
GATACGAAAA ATGGAGAAAA TAGAACCGTG ATCTGTTCAC ACGGGACGTT AGATATGTTG
AACAAGTATT TAAATCGAAT AAATATCGAA AATGGACCAG ATGATTATAT AATCCAGGTA
TCAGTAAAAA GAGAAGAAAT GGACGATAAA TTAGCCACAA CTCATCTATC ACGTAAAATA
ACAGAATTAG TAAAGGAATT AAAAAAAGAA GGCATAATGG AAAATAATAT GCATATAGTT
TTGCATTCGT TACGACACGG GCGAGCATAT GCGTTATATA AAGCCGGTGT GCCAATTCCA
CAGATACAGC ACTTTCTGGG GCATAAAGAT CAGCGAACTA CACTGGGTTA TATCCATTCA
TTTAAGGTTT ATATGGAAAC ATTAGACGAT CTTCAAAAAC AATTAGACCG TGAATAA
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| Protein sequence | MVSDFEKEDV LEDITSNNAD QKSKKKVNGK KQKPVTISEF EKDLFESRGI GDSNIIGENN
SENEEKTLSD QEYIEKWKNL YAEKRKGAVA QSTLINELSK LPVFFRYTIK IGKKPDEMTK
NDFIKFFDYL QNTKKPHDNR NKKNNSKKVS KPLSRNTIWK YYLLLKTFYL LLELDNFDEF
SEYNAKIPRL KKPTKSDHYD PLLKEHFDEI IRRIIRSTSR TRVRDVLALM LLWDSGARVS
EVLNLTYKDC DFKTGRFKFF DTKNGENRTV ICSHGTLDML NKYLNRINIE NGPDDYIIQV
SVKREEMDDK LATTHLSRKI TELVKELKKE GIMENNMHIV LHSLRHGRAY ALYKAGVPIP
QIQHFLGHKD QRTTLGYIHS FKVYMETLDD LQKQLDRE
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