| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1176 |
|---|
| Symbol | |
|---|
| ID | 4928729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1124283 |
|---|
| End bp | 1125332 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640166666 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001097688 |
|---|
| Protein GI | 134046203 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.204113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCAGC TACGCTGCCA CGGTTTAGAA GGGTCGTCAG GCTATCGCCT TCCTCATGCC
CTTACGGGCA TAAGGCTTCG CCAAACTCAT ATCGTTACTT TAAAAAAGGA ATTATCAATG
GCTAGAAATA GAACAAGATC ATTAAAACAG CAATTTAAGT TTTCAATCGT TGATTCATCA
TTTAAAGAGC ATTTAGACAA ACATTCGCTT AAAAAAGATG CTGAAAACGA TAATTCGTGG
AGAATTTATT CATATTCCGA AAAAAATAAC CTTATGGACT TGTCAGCGAG TTTTTGTAAA
TTTTTAAATA AAAATCATGC CGAGATTAAA CAAATAAAAG ATATTAACGA ATTACATGTT
CAAGAATTTT TAAATTTTAA AGCCTCGGCA TGTACTACTG AAACACTTTA TAACTACAGA
ACTAGATTTA TAAAAATTTC AAAGTGTGTA AACCATGCAT TTCAATCATG TGCACTTGAT
TTTTCCAATA CTGTGATCCC AATGTCCGGA GTTGGGAAAT CAAAAAGAAA AATTGCGATG
ACAGAAGAAC ATGCAGAACT TTTGCTAAAT TACTGTAAAC ATAGTGATGC GAAAGCCGCA
ATTGGCGTTA GATTCGCCTT AGCTTTTGGA CTGCGTGTTT CCGAAGTTAC AAAGATAATG
TCGAAAGATA TTGATTTGGA TAATTTAAAA CTGCACATTC ATAAATCAAA AGGTGGGAGA
AGCAGAAATA TTCCAATTCC AAAAGAACTG GTTCCATTTT TATCGAATGT TAAAAATGAA
TTTGGCGAAA ATCAGCGAAT TTGCCCCTTG CGGAATGATT CGGTCAACAG ATTTGTATAT
CGGGTTTTCG AGTTTCACAG AATAAATGAC TACAAAGATG CAAGAACGTC TGTTCATGCC
GCAAGAAAAC TTTGGGCGCA GAAATTGTAT GATAAACTTC GAAATGAGGG AAAAACAATA
AAAGAAGCCT GTGAAGAAGT ATCCGTTCAA CTTGGTCACG GAAAAGATAG AAAAGATGTA
TTTAATAGAT ATATATCGAA TATTTGGTGA
|
|---|
| Protein sequence | MCQLRCHGLE GSSGYRLPHA LTGIRLRQTH IVTLKKELSM ARNRTRSLKQ QFKFSIVDSS
FKEHLDKHSL KKDAENDNSW RIYSYSEKNN LMDLSASFCK FLNKNHAEIK QIKDINELHV
QEFLNFKASA CTTETLYNYR TRFIKISKCV NHAFQSCALD FSNTVIPMSG VGKSKRKIAM
TEEHAELLLN YCKHSDAKAA IGVRFALAFG LRVSEVTKIM SKDIDLDNLK LHIHKSKGGR
SRNIPIPKEL VPFLSNVKNE FGENQRICPL RNDSVNRFVY RVFEFHRIND YKDARTSVHA
ARKLWAQKLY DKLRNEGKTI KEACEEVSVQ LGHGKDRKDV FNRYISNIW
|
|---|
| |