| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1155 |
|---|
| Symbol | |
|---|
| ID | 4928448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1095146 |
|---|
| End bp | 1096108 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640166646 |
|---|
| Product | CaCA family Na(+)/Ca(+) antiporter |
|---|
| Protein accession | YP_001097668 |
|---|
| Protein GI | 134046183 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0541377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGAAT ATTTTATATT ATATCTAATA TTTGGGGGTA TTTTACTCAT ATATGGCAGT
GAATGGTTCA TTGCTGGAAG CATAAGTATT GCAAAACATC TCAAGATTTC AAATTTTGTA
ATCGGTGCAA CAATTGTCGC ATTTGGAACG TCACTTCCTG AAATTGTAAC AAGTAGCTAT
GCTGCACTTT CTGGATCCCC CGACCTTGCA GTTGGAAATG CTGTTGGAAG CTGCATTGCA
AATATCGGAA TTATTTTGGG AATTAATCTA TTATTGTACC CAATAATCAT TAAAAAAAGA
GAAATCTTAA AAAATGGAAA TATTTATCTT TTAGCAACGA TTTTACTGGT TATTTTGGGC
TACAACGGCT TTTCAAGATT TGACGGACTG ATATTATTTC TTTTTATGAT TATTTACGTG
ATATATACAA TTAAAACGAA TGAATCTGAC AGTGAAGAAA TTATTTCAGA TATTACTGTT
AAAAAAGCAT TGTTATTTAT TTTAATTGGT TTAGTGGGGG TAATTTTGGG AAGTGATTTA
CTAATAATGG GTGCAAAAGG GATTGCAGAA TATTTCAACA TCCTTGAAAG TATTATTGGA
TTTTCACTCG TTGCATTTGG AAATTCATTG CCTGAACTTG CAACATCAAT ATCTGCTGCA
AGAAGAAATC TTGGAATTAT TGTTCTTGGA AATGTAATCG GAAGCAATAT TGCAAATATT
TGTATCGCAT TGTCAGTTTC TGCGATGATT GTAGATATTC CCAAATACAA CGTGGAATTG
ATGGTAAATA CGTTCATGGC ATTTTTACTA ATTTTTACTT TAAATCGGGA AAAAATAAAG
AAAATATTAA ACTTTAAAAA CGTTAAAATG GAGTATTTCT CAAAAATGGA TGAAATTGAT
GGTATTTTTT ATATATCGAC CTATTTGATA TTTTTAGCAT ATCTTTTAGG GAAGACATTT
TAA
|
|---|
| Protein sequence | MLEYFILYLI FGGILLIYGS EWFIAGSISI AKHLKISNFV IGATIVAFGT SLPEIVTSSY
AALSGSPDLA VGNAVGSCIA NIGIILGINL LLYPIIIKKR EILKNGNIYL LATILLVILG
YNGFSRFDGL ILFLFMIIYV IYTIKTNESD SEEIISDITV KKALLFILIG LVGVILGSDL
LIMGAKGIAE YFNILESIIG FSLVAFGNSL PELATSISAA RRNLGIIVLG NVIGSNIANI
CIALSVSAMI VDIPKYNVEL MVNTFMAFLL IFTLNREKIK KILNFKNVKM EYFSKMDEID
GIFYISTYLI FLAYLLGKTF
|
|---|
| |