Gene MmarC5_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1100 
Symbol 
ID4927553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand- 
Start bp1051671 
End bp1052261 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content31% 
IMG OID640166594 
ProductTetR family transcriptional regulator 
Protein accessionYP_001097617 
Protein GI134046131 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA GAAATTTGAT CCTTGAAAAA TCAAGAGAAC TTTTTTTTAA AAAAGGGTAT 
ATTGAAACGT CACTTTCTGA AATTGCAAAA GAATGCAATA TTTCAAAAGG GGGTCTTTAT 
TACTATTTTG AAAGAAAAGA AGACCTCTAC ATCGAAACAA TAACCTCGAT ACTCGAAGAA 
AATGGAAAAG CTGTTCTTTC ATGTATTGAA AAAGAAAGCT GTTTTGAAAA TGCCATTTTT 
GAATTTATAG AACAGGCGAT TTTAATAAGA AATAGGTATT TCAGTAAATA TGGTAAAGGT 
GAAGAGAAAA CCGTATACTT CGGACCGTTT TCTGACGCAA TAAAAAAATT TCCAAAGATA 
TGGGAATTCA ATAATAATAT ATATGAAAAC GCTATAGACA AATTGGTTAA CAGAATAATT 
TTGGCACAGG AAATGGGGGA AGTCAAAAAA GAATTGGATC CCCATACCCT CGCAATCCAT 
TTTTGCTCAA TATTTGAAGG CTTACCTCTC GTTTCATATT ATACTAACAA AAAATTTGAC 
GATAAAGCCA GAATGGTAAT TGGTTCATTC TGGGAACTTA TAAAAAATTA A
 
Protein sequence
MTTRNLILEK SRELFFKKGY IETSLSEIAK ECNISKGGLY YYFERKEDLY IETITSILEE 
NGKAVLSCIE KESCFENAIF EFIEQAILIR NRYFSKYGKG EEKTVYFGPF SDAIKKFPKI 
WEFNNNIYEN AIDKLVNRII LAQEMGEVKK ELDPHTLAIH FCSIFEGLPL VSYYTNKKFD 
DKARMVIGSF WELIKN