Gene MmarC5_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1097 
Symbol 
ID4927530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand- 
Start bp1049497 
End bp1050102 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content30% 
IMG OID640166591 
Productribonuclease H 
Protein accessionYP_001097614 
Protein GI134046128 
COG category[R] General function prediction only 
COG ID[COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAA TTTATGCGGT TCGAAAAGGG CGAAAAACCG GATTATTTGA AACATGGGCA 
GAATGTGAAA CTCAGGTTAA AGGATTTTCT GGAGCTGAAT TTAAAAGTTT TACGTCCAAA 
AAAGATGCGA ATGATTATTT AACTCAAAAA ACTGGGCAAA AACAAAATAA TATAAAATCA 
GACGAATTTA AAAAAGATAT AATGTATGCA TGGGTTGATG GAAGTTTTAA TTTAAGGAAT 
AATGAATATG GAGCAGGCGC TTTAATAATA TTCAATGGGA TGGAAAAAGA AATTAAATCT 
AAGGGAAATG ATGAAGAATT ATCAAAAATG AGGAATGTTG CAGGCGAAAT TTTAGCTTCA 
GAACTTGCAA TGGAATATGC AGTTTCTAAA AATGTAAAAA ATTTAGTAAT ATACCACGAT 
TATCTTGGAA TTGAAAAGTG GTGTACTGGA AAATGGAAAA CAAACAAAGC AGGAACGATT 
GAATATAAAG AAAAATGTAA AAATTATCTT AAAAGATTAA ATATTGAATT TTTGAAAGTT 
AAGGCGCATT CTGAGGATAA AAATAACGAA ATTGCTGACA AATTGGCAAA AGAAGCACTT 
TTATAA
 
Protein sequence
MAKIYAVRKG RKTGLFETWA ECETQVKGFS GAEFKSFTSK KDANDYLTQK TGQKQNNIKS 
DEFKKDIMYA WVDGSFNLRN NEYGAGALII FNGMEKEIKS KGNDEELSKM RNVAGEILAS 
ELAMEYAVSK NVKNLVIYHD YLGIEKWCTG KWKTNKAGTI EYKEKCKNYL KRLNIEFLKV 
KAHSEDKNNE IADKLAKEAL L