| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1023 |
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| Symbol | valS |
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| ID | 4928382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 988321 |
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| End bp | 990981 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640166521 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001097544 |
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| Protein GI | 134046058 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.17818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAA AAGAAGAATA TTCAATAGAA CTTGAGAAAA AAGTTCAGGA AAAATGGGAA
AACGAAAAAA CATTCAAATT CTTAGAAGAT GAAAAAAGGC CCCCATATAT TATCGATACC
CCACCACCAT ATCCAACAGG CAGAATGCAC CTTGGACACG GGCTTAACTG GACTTATATG
GACATCATTG CGAGATTTAA AAGAATGAAT GGATACGATG TGCTTTTCCC CCAGGGCTGG
GACTGCCACG GGCTTCCAAC AGAAGTTAAG GTTGAAGAAT TAAACAATAT CACTAAGTCA
GATATTGACA GACATGAATT TAGAAGACTC TGTGTAGAAT TAACTGATGA AAACGTAGAA
AAAATGAGAG GCCAGGTTAG ATCCCTTGGA ATCTCGATTG ACTGGGATAG AGAATACATT
ACAATGAATC CAGACTACGT TAGAAAATCA CAGACTGCAT TTTTGAAAAT GTACGAAAAA
GGGTTAATTT ACAGGGGCAA ACACCCCGTA AACTGGTGCC CGAGATGTGA AACTGCTATC
GCATTTGCAG AAGTAGAATA TCAAGAAAGA ACTTCAAAAT TAAACTACAT AAAATTCCCA
TACGCAGAAA ATGCTGAAAA ATACCTTGAA ATTGCAACAT CACGACCTGA ATTAATGGCT
GCTTGTGTTG GAATCGTTGT GCACCCTGAA GATGAAAGAT ACAGCGATGT TATTGGAAAA
ACCGTTAGAG TTCCATTATT TAATCAGGAC GTTACAGTTT ACCCTGATTC CGATGTAGAA
CAAGACTTTG GTACTGGAGT TGTAATGGTT TGTACTTTTG GTGACAAAAC TGACGTTACA
TGGGTAAACA GGCACAAATT AGAAGTTAAA AAAGCAATTA ATGAAAAAGG ACAGCTTACA
GAAATCTGCG GAAGATATGC CGGTCAAAAA TCAGACGATG CAAGAAAAGA GATTATTTCT
GATTTAATTT CTGAAGACTA CATGATAAAA CAGGACCCTC TTGAACAGAA CGTTGGTTCA
TGCTGGAGAT GTAAAACCCC TATCGAGATC ATTGTTGGAG ATCAATGGTT TGTAAACGTT
ACAAAGCTAT TAAAAGAAGT AGAAAACGCT GCAAACGAAA TTTCATGGGT TCCAGAACAT
ATGAAAGCAA GGCTTTTAAA ATGGGTCGAA GATATGGGCT GGGACTGGTG TATTTCGAGA
CAGAGATTGT TTGCGACCCC AATTCCTGTT TGGTACTGTA AAGAATGTGG AGAAATCATT
GTAGCAAAAC CTGAAGATTT GCCAATAGAT CCAACAAAAG ACAGTCCATA CACCTGTAAA
TGTGGAAACT CAAAGCTTGT TGCAGAAACT GATGTTTTAG ATACATGGAT GGATTCATCA
ATTACCCCAC TCGTTATAGC AGGATGGCTT GAAGACGAAG AGTTCTTCAA AAAACACTAC
CCTGTTCAAT TAAGACCTCA AGGCCACGAT ATCATCAGAA CGTGGGCTTT TTACACGATT
GTTAGATCAC TTGCAATTAC TGGAAAAAAA CCATGGGATG AAATCGTAAT TAACGGAATG
GTTTTCGGTG AAGATGGATT TAAGATGAGT AAAAGCAGGG GAAACGTTGT AGAACCTGGA
GAAATTACTA AAACTTACGG TGCAGACGCA TTAAGATTAT GGGCTTCAAA CAGCACCATT
GGAAAAGATG TTCCATTTGC CTGGAAAGAA GTTGAATATG GCGGAAGATT TTTACGAAAA
ATATGGAATG CATGTAAATT TGCAAAAATG AACGTTTCAG ATGAAGTAAT TTCCGAATTA
AAATCATTGA AATCTATTGA AATTGATAAC CCTGTTGATT TATGGATTTT AAGTAAATTA
AATGATTTAA TTTCAAAAGT TTCAAAAGAC CTTGGAAATT ACAAAATAAA CACAGTTGTG
GAAATTCAGA AATTCTTATG GCACGAATTC TGCGATAACT ACATCGAAAT GGTAAAACAC
AGACTCTACA ACAAAGAAGA ATCTGAAAGC GCTCAAAAAG AAAAATTAAT GGCACAATAC
ACACTTTACA AAGTAATTAC AGAATCTGTA AAATTACTTA CACCATTTAC ACCACACTTT
GCAGAAATCG TTGGGGAAAT CTACGAAATC GACGATTTGC ATACCGCATG GCCAGTTGCA
GATGAAAGCA TGATATGTTT AGAAAACGAA TTTATCGGAA AAGTTGCAAA GAATACGGTT
GCATCAATCA GGAGATACAA ATCAAACAAA GGAATGCCAC TTAACGCAGA ATTAAACAAA
GTTGAAATGT ACGTAAGCGA TGAAAAAGAT TTCAATGCTC TTTCAAAAGT TTCAGAAGAT
ATCAAAAAAT CTTTGAAAAT TAAAGAACTT GAACTAAATC TTGGAAAACC ACTCCTTGAG
CAAAAAATTT CAGAAGTGAC CCCAAACAAG TCCAAAATCG GTCCAGAATT TAAAAAAGAT
GCTGGAAAAG TAACTGCGCT TATTAAAGAA GCAGATGCAG AAACGATCGA AAAAATGCTT
TCAGAAGGAA TCGAAACTGA ATTTGGTGCT TTGAACAAAG AACACATCAA AGAAGTAAGA
AGAGCAATAT ATAACAAAGG AGAAATTGTT GAAACTGCAG ATATCGACAG TTTAATCGAT
ACTATTGCAA TAATTCAATA A
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| Protein sequence | MEIKEEYSIE LEKKVQEKWE NEKTFKFLED EKRPPYIIDT PPPYPTGRMH LGHGLNWTYM
DIIARFKRMN GYDVLFPQGW DCHGLPTEVK VEELNNITKS DIDRHEFRRL CVELTDENVE
KMRGQVRSLG ISIDWDREYI TMNPDYVRKS QTAFLKMYEK GLIYRGKHPV NWCPRCETAI
AFAEVEYQER TSKLNYIKFP YAENAEKYLE IATSRPELMA ACVGIVVHPE DERYSDVIGK
TVRVPLFNQD VTVYPDSDVE QDFGTGVVMV CTFGDKTDVT WVNRHKLEVK KAINEKGQLT
EICGRYAGQK SDDARKEIIS DLISEDYMIK QDPLEQNVGS CWRCKTPIEI IVGDQWFVNV
TKLLKEVENA ANEISWVPEH MKARLLKWVE DMGWDWCISR QRLFATPIPV WYCKECGEII
VAKPEDLPID PTKDSPYTCK CGNSKLVAET DVLDTWMDSS ITPLVIAGWL EDEEFFKKHY
PVQLRPQGHD IIRTWAFYTI VRSLAITGKK PWDEIVINGM VFGEDGFKMS KSRGNVVEPG
EITKTYGADA LRLWASNSTI GKDVPFAWKE VEYGGRFLRK IWNACKFAKM NVSDEVISEL
KSLKSIEIDN PVDLWILSKL NDLISKVSKD LGNYKINTVV EIQKFLWHEF CDNYIEMVKH
RLYNKEESES AQKEKLMAQY TLYKVITESV KLLTPFTPHF AEIVGEIYEI DDLHTAWPVA
DESMICLENE FIGKVAKNTV ASIRRYKSNK GMPLNAELNK VEMYVSDEKD FNALSKVSED
IKKSLKIKEL ELNLGKPLLE QKISEVTPNK SKIGPEFKKD AGKVTALIKE ADAETIEKML
SEGIETEFGA LNKEHIKEVR RAIYNKGEIV ETADIDSLID TIAIIQ
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