| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1021 |
|---|
| Symbol | |
|---|
| ID | 4928322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 986777 |
|---|
| End bp | 987475 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 640166519 |
|---|
| Product | DNA-3-methyladenine glycosylase III |
|---|
| Protein accession | YP_001097542 |
|---|
| Protein GI | 134046056 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.499104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATA AAGAAATTTT ACAAAAAATT TACGACTATT TATTTGAGTT ATACGGCCCA
CAAGGCTGGT GGCCGCTTTT AGAATTCGAT GGATGCAATC CTACAAAAAC TGGCTCAGTA
AATGGATATC ACCCAAATAA TTACGAATAT CCAAAAACAA AAAACCAGTG CTTTGAAATC
TGTATCGGTG CAATTTTAAC TCAAAATACC TCATGGCCAT CTGTTGAAAA ATCTTTGAAA
AATTTAAGAA ATTTAATAGA AATTAAGCCA GAAAATATAA TTAATTTAGA TATTGAACTT
TTAAAAGAAG CGATTAAACC AAGCGGATAC TACAATCAAA AATCGGAACG TTTGAAAGGT
TTTTCAAAAT ATTTTATTGA ATTAAAAAAT ACGCCAACAA GCGAAGAACT GCTAAAATTA
AAAGGAGTTG GCCCAGAAAC TGCTGATTCG ATGCTTCTGT ATGCATTTAA AGTTCCAAGT
TTTGTAATTG ATGCGTACAC CAAAAGAATA CTTTTTAATT TAAATTTAAT TAAAAATAAC
GAAAAATACG ATAAAATTAA AGAATTATTT GAAGAAAATA TTCCAAAAAA CCTTGAAATG
TACCAAGAAT ATCATGCGCT TTTGGTTGAA CATGCTAAAA ACTACTACCG AAAAAAAGAA
AATTATTATA AATGTCCACT TCTAAAAATA ATAAAATAA
|
|---|
| Protein sequence | MEDKEILQKI YDYLFELYGP QGWWPLLEFD GCNPTKTGSV NGYHPNNYEY PKTKNQCFEI
CIGAILTQNT SWPSVEKSLK NLRNLIEIKP ENIINLDIEL LKEAIKPSGY YNQKSERLKG
FSKYFIELKN TPTSEELLKL KGVGPETADS MLLYAFKVPS FVIDAYTKRI LFNLNLIKNN
EKYDKIKELF EENIPKNLEM YQEYHALLVE HAKNYYRKKE NYYKCPLLKI IK
|
|---|
| |