| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1010 |
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| Symbol | |
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| ID | 4928299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 976768 |
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| End bp | 978210 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640166508 |
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| Product | C/D box methylation guide ribonucleoprotein complex aNOP56 subunit |
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| Protein accession | YP_001097531 |
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| Protein GI | 134046045 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTCA TTGCCTTTGC ACCATATGGA GCATTTGCAC TTGAAGCGAA CTCGAAAAAC
GGTGAATATT CATTAGACGA CATCAAATAT TATAAAATAT TTGAAAACGA GGATATTCCA
AAAATAATGT ATGAATTGAG ACAGGGAAAT TTTGAAATAA TCGATGAATT GAAAAACGAA
TGGGAAATTG GGGAAGAAAG CATTAGTTTT GAATATTCAA GTTCCAAAAA TCCTGCCGGA
GAACTTATTC GAGATAATTT ATACAAATTA GGTCAAAAAT ACGAAGTCTA TACAGATGAA
GCTGATTTTG TTTCAAAAAT GAACGCTTGG GCAACATCTT TCACAAAATC AATGATGAAA
AAGTCATCAG AACAGAAAGA TAAATTGATA GTTCAAACAG TAAATGCTCT TGATAACCTT
GATGAAACTC TAAATCTATT TTCAGAAAGG CTTAGGGAAT GGTATTCACT TTACTTCCCT
GAAATGGACA ATATTGTTAA GAAACACGAT ATTTATGTGG GTTTAGTTTC CGAATACGGG
GATAGAGAAG AGTACACGAG AACAAAACTC AAAAAAACAA TGCCTTCAAA TGTGGCAAGA
ACTATCTCAC TTGCTGCAAA AGACTCAATG GGTGCAGATG TATCTGAATT TGATTTGGAT
ATCATGAAAA ACCTTGCAAA TGAAATAAAA AGTATGTATG AATACCGAGA AAGATTGCAA
GAATATTTGG AGACTTCAAT GAACGAGGTT GCTCCAAACT TAACAAAAGT TGCAGGTGCG
TCACTTGGTG CAAGATTGAT AAGTCTTGCA GGTGGAATTG AAAGACTTTT AAGACTCCCT
GCATCAACGA TACAAGTTAT AGGTGCAGAA AAAGCATTAT TTGCACACTT AAGGGAAAGG
GCATTACCTC CAAAACACGG TGTAATATTC CAGCACCCCC TCATTCAAGG AAGCCCATGG
TGGTTGCACG GAAAGATTGC AAGGGCAATT TCATGTAAAA TCTCTATTGC GATAAGGGCA
GATGCTTTTG GAAATGATAT TTCAGACATG TTAATTGAAG ACATGAACAA AAAAGTAGCT
GAAATAAAAG AAAAATTCCC TGAACCAATG AGAAAAAGAA GACCAAGACC TGATACGAGA
AGTTTTGGTA ATAAATGCGG TCAAGATAGG GATAGGGGAT CACAGGGTGA CAGAAAACCA
CGTGGTAAAC CACAAGGTAA ACAAGGCGAC TCTAAAAAAG GTGGAAAGCC GTTTGGTAAA
AAACCTGCTG GAAAAGACGA CAGAAGGGAC AACAGAAAAG GCGATAAGAA ACCATTTGGC
GGAAAACCAA AAGGTAGTGG AAATCAGCCT CCAAAGGAAA GATCTGGCGA AAAAAGAAGA
GATTCAACAA AAAAAGTTAA AGCTGAAAGA AAAGTAATCG GAAAAACTTC TTCACAGAAT
TAA
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| Protein sequence | MLFIAFAPYG AFALEANSKN GEYSLDDIKY YKIFENEDIP KIMYELRQGN FEIIDELKNE
WEIGEESISF EYSSSKNPAG ELIRDNLYKL GQKYEVYTDE ADFVSKMNAW ATSFTKSMMK
KSSEQKDKLI VQTVNALDNL DETLNLFSER LREWYSLYFP EMDNIVKKHD IYVGLVSEYG
DREEYTRTKL KKTMPSNVAR TISLAAKDSM GADVSEFDLD IMKNLANEIK SMYEYRERLQ
EYLETSMNEV APNLTKVAGA SLGARLISLA GGIERLLRLP ASTIQVIGAE KALFAHLRER
ALPPKHGVIF QHPLIQGSPW WLHGKIARAI SCKISIAIRA DAFGNDISDM LIEDMNKKVA
EIKEKFPEPM RKRRPRPDTR SFGNKCGQDR DRGSQGDRKP RGKPQGKQGD SKKGGKPFGK
KPAGKDDRRD NRKGDKKPFG GKPKGSGNQP PKERSGEKRR DSTKKVKAER KVIGKTSSQN
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