Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0996 |
Symbol | |
ID | 4928003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 963361 |
End bp | 965310 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640166494 |
Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
Protein accession | YP_001097517 |
Protein GI | 134046031 |
COG category | [J] Translation, ribosomal structure and biogenesis [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase [COG1370] Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit |
TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAA TAAAAGCTCG TGATGCAATG GGAAGGCTTG GTGTAATCAC GATAAACGGA AAAAAAATTG AAACTCCAAC AATTATGCCT GTAATTCACC CAAATCCTAA AAAACAGACG GTTTCAATGG ATTTAATAAA TAAACTGGCT GACGTTGTAA TTACAAACTC TTACATAACA TATACAACAC CAGAACTCAG AGAAATTGCG GAAACAAAAG GAATTCACGA ATTAATCGAC TTTAAAAATG TCGTTGTAAC CGACAGCGGC TCATTTCAGT TGAGTGTTTA TGGCGATGTA AATGTCGGCC CAATGGAAAT AATCGATTTT CAGGAAAAAA TCGGAGTAGA TGTTGGAACA ATACTTGATA TCCCAACTGG TCCGGATGTT TCAAGAGAAA AAGCTGAAAG CGATTTATTG GAAACCTTTA AAAGAGCAAA AGACTCGATT AAAAGAAGAA AAGAAATGGG CTACAAACTC GCACTTAATG GAACTATTCA GGGTTCAAAG TACTTGGATT TAAGGCAGAA AAGTGCTGAA GTTATGGGTA AAATGGACTT TGATATCTAC CCGATTGGCG CAGTAGTTCC TTTAATGGAA GATTATAGGT ACAGAGAGGT TGCAGAAGTT ATTTTAAATT CAAAAATGCA TCTTCCAACA AACAAGCCTG TTCACCTTTT TGGATGCGGA CACCCGATGT TATTTGCACT GTCAGTTGCA CTTGGATGTG ATTTATTTGA CAGTGCCGCA TATGCTCTTT ATGCTAAAAA TGGAAGATAT TTAACAGCAG AAGGAACCCT TCACCTTGAA GACATGAAAG ATTTAAAAAG TTTCCCTTGC ACCTGTAAAG TATGTAGTGA ATATACTCCA AAACAACTTT TTAACCTGGA AGAAAAGGAA AAAACGAGAT TACTTGCAGA ACACAATCTC TACGTTACTT TTGAAGAAAT TGATAGAATC AAAAATGCAA TAAAAGAAGG AAACCTCTGG GAACTCGTTG AAGAAAGATG CAGAAGTCAC CCTAAACTTT TGAACGGTTT GAGAGTTATT TCAAAATACA TGGATTTCAT TGAAAAACAC GACCCTGTTT CCAAAAAGTC CGGATTTTTC TACACAGGAT ATGAAAGTAT GGATAGGCCT GAAATTTACA GGCACAAACA AAGGCTTGAG AGAATTCAGT ACGATAAAAT CTATGTAACA AGCGTGTCAG AAAACACTTC AAAGCCATAC CACGAAAATT TAAGCAATGT TCCGTGCGAC GTTGATGTAC TTATAAAAGA CAGTGTATTT GGGTTAGTTC CTTTAAATAT CGATACAATG TATCCTTTAG CTCAAAATGA AGTACCTGAT CTGTATGATT TTGAAAAGAA ATACAACAAT GAATTTGTAA GCGAATTTAG AGAAAAACAC ACTGAAAAAA TACTCGATAT AAGTACATAT AATTATTACA TAAACCACTA CGGCAAGAAA AAAGATTGCG ACAAAATCAA TCCCGATATA TTCAGAATCG GAAAAATGCT CGAATACCAG TACGGGGCAA AAATACTCGA CGATGAATTA ATGGGAAAAG TAAAATCAAG AAGAAGTAAA AATACCGGTA GAATTAGAAA TCTTTTACTT GAAAAGGAAG TTTTGTTTAC ATTACGGGCA AATGACAACT TTTTAATTCC TGCAAAATAT GGTGCTGAAC TTTTACATGA AAAACTCGAG TTTCCTAACT ATAGGATCGT AATTGACAGC AGTGTTGAAG AATTTGCAAG AGCTGGAAAA TCTGTTTATT CCAAATTTGT TAAAGACTGT GATCATGAAT TAAGGCCATT TGAAGAAGTA TTAATTGTAA ATTCTGACGA TGACTTGTTG GCATACGGTA CAACAATATT AAATGGTCAA GAATTGATGG AATTTGATTA CGGTGTTGCG GCAACCCTTC GGGGAGGAAT AAAAAAATAA
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Protein sequence | MFEIKARDAM GRLGVITING KKIETPTIMP VIHPNPKKQT VSMDLINKLA DVVITNSYIT YTTPELREIA ETKGIHELID FKNVVVTDSG SFQLSVYGDV NVGPMEIIDF QEKIGVDVGT ILDIPTGPDV SREKAESDLL ETFKRAKDSI KRRKEMGYKL ALNGTIQGSK YLDLRQKSAE VMGKMDFDIY PIGAVVPLME DYRYREVAEV ILNSKMHLPT NKPVHLFGCG HPMLFALSVA LGCDLFDSAA YALYAKNGRY LTAEGTLHLE DMKDLKSFPC TCKVCSEYTP KQLFNLEEKE KTRLLAEHNL YVTFEEIDRI KNAIKEGNLW ELVEERCRSH PKLLNGLRVI SKYMDFIEKH DPVSKKSGFF YTGYESMDRP EIYRHKQRLE RIQYDKIYVT SVSENTSKPY HENLSNVPCD VDVLIKDSVF GLVPLNIDTM YPLAQNEVPD LYDFEKKYNN EFVSEFREKH TEKILDISTY NYYINHYGKK KDCDKINPDI FRIGKMLEYQ YGAKILDDEL MGKVKSRRSK NTGRIRNLLL EKEVLFTLRA NDNFLIPAKY GAELLHEKLE FPNYRIVIDS SVEEFARAGK SVYSKFVKDC DHELRPFEEV LIVNSDDDLL AYGTTILNGQ ELMEFDYGVA ATLRGGIKK
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