| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0990 |
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| Symbol | |
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| ID | 4929110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 959149 |
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| End bp | 960321 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640166488 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001097511 |
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| Protein GI | 134046025 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATAA ATATTAACAA ATTCATTTTA GATATGGAAA GATTTGACGG AACACTTAAA
AAATACCCTG AAGATTTCAT TGTTGAAGAG ATAACTCCCG AAGGAACGGT TCTTGAAGTT
GGAAAAGAAA TCGGTTTTGA AGATGTTGAA AAGTGGCACG GCTCATTTAT CCATTTTACA
GTTGAAAAAA CGAACTGGAA CACGATGGAT GCATTAAAAC AGATCGTAAG AACAACAAAA
ACAAAAAGGA AAAATTTTGG ATTTGCAGGA ACTAAAGATA AATTTGCAGT AACTACTCAA
AGATTTGGGT GTTTTGGACT TAAAAAAGAA CAGCTTGAAA ATATTAACAT TAAAGATATT
GTCATTCGAG ATGTTCAAAA ATCAAATAAA AAACTCAGAA TGGGTGATCT CTGGGGAAAC
AAGTTTACGA TAAAAATTAG GGGCTTGGAT CTTTCAAAAA AAGAAATTAA AAGAATTTCC
GATTTAAAAT TAGATTACGT GTTAAATTAC TACGGAATAC AGAGATTTGG ACTCATCAGA
CCAATTACGC ATATTGTTGG AAAATTTATC TATGAACGGG ACTTTGAAAG TGCATTTTAC
ACCTACTGCG GAACTCCAAT AAGTGAAACT GGCGATTCCC TTGAAGCACG ACAGCTCGTT
GACGTGGGCG AATTTAAAAA AGCTTTAAAA TTATTTAATA GAAACCACGA CTACGAAAAA
AGATTAATTC AGCAGTACTT AAAATATAAA GACTTTAAAA TGGCTTTTAC CGCATTACCG
CCGCAATTAA ACAGCATGTT TGTAAATGCT TATCAGGCAT ATCTATTCAA CGAAATGATA
AACAAAAGAT TTGAATACGG GTTTGATGCA AAAGAAGGAG ATATATTGGA AGACAATACT
CCAACGGGGA CTTTGATTGG GTACAATACT GAATTTAGCG GTGGAATTCA GGGTGAAATT
GAAAAAGAAA TTGTTGAAAG GGAAAACCTA GATTTGAAAA AATTCAAAAT CGAAGACTTT
GGAAATTTCT ATGGAACGAG AAGAAAAATG ATAACTCCAA TTTATGACTT TAAAAGCAGC
TTTGAAAATG ATATTTTTGA ATTAAGCTTT AAACTTGAGC GCGGAAATTA CGCTACAATC
GTTACAAGAG AATTTACTGG AAATTTGAGT TAA
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| Protein sequence | MPININKFIL DMERFDGTLK KYPEDFIVEE ITPEGTVLEV GKEIGFEDVE KWHGSFIHFT
VEKTNWNTMD ALKQIVRTTK TKRKNFGFAG TKDKFAVTTQ RFGCFGLKKE QLENINIKDI
VIRDVQKSNK KLRMGDLWGN KFTIKIRGLD LSKKEIKRIS DLKLDYVLNY YGIQRFGLIR
PITHIVGKFI YERDFESAFY TYCGTPISET GDSLEARQLV DVGEFKKALK LFNRNHDYEK
RLIQQYLKYK DFKMAFTALP PQLNSMFVNA YQAYLFNEMI NKRFEYGFDA KEGDILEDNT
PTGTLIGYNT EFSGGIQGEI EKEIVERENL DLKKFKIEDF GNFYGTRRKM ITPIYDFKSS
FENDIFELSF KLERGNYATI VTREFTGNLS
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