Gene MmarC5_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0956 
Symbol 
ID4928445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand+ 
Start bp930377 
End bp931390 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content31% 
IMG OID640166454 
ProductRNA 3'-terminal-phosphate cyclase 
Protein accessionYP_001097477 
Protein GI134045991 
COG category[A] RNA processing and modification 
COG ID[COG0430] RNA 3'-terminal phosphate cyclase 
TIGRFAM ID[TIGR03399] RNA 3'-phosphate cyclase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.107873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAA TTGATGGAAG TTATCTCGAA GGTGGAGGAC AGATTGTAAG AACCGCAATT 
TCTCTTTCTG CAATAACTAA AAAACCAGTT AAAATCATTA ATATTCGAAA AAATAGAAAA 
AATCCTGGCC TTTCAAACCA GCATATTGCC TGCGTTGAGG CAGTTTCAAA AATCTGTAAT 
GCAAACGTTG AGGGTCTTTT AAAAGGCTCT GAAACATTGA TTTTTTATCC TGAAGATATT 
ACTGCTAAAA ATTTTGAGAT AGATATTAAA ACTGCTGGAA GCATTTCGCT TGTTATTCAA 
TCAATACTCC CCATGTGTCT TGCAATTAAT AAAAATATCG AAATTACACT AATTGGTGGA 
ACGAATGTTG AATTTTCACC ACCAATTGAT TATATTAAGA AGATAACATT GAAATTTTTA 
GAAAATATTG GGATTAATTC TGAAATAAAC ATTATTGAAC GCGGATTCTT CCCAGAAGGT 
GGCGGAATTG TTAAAATATC ATTAAAACCT TCAAAAATTG TTCCATTGGA ATTAATCGAA 
AATAAAAATA TCGAAATTAA AGGAGTTGTT TTTAACCAGG ACCTCGATGA AAATATTTCA 
AAAAGAATAA GAAAATCTGC AAGCGATATA TTACTAAATA AAGGATTTTG TCCTGAAATC 
AAGCTTGAAA ACAGAGAAGG AAAAAGTACG GGTGTTGGAA TATTTTTATT CAACAAATAT 
ATTGGTTCAG ATTGTCTTGG AAAAAAGGGG CTTTTATCAG AAACTGTTGG AAAAATTGCA 
TCTGAAGACT TACTTGAAGA GTTAGGTACA AAAATGGCGA TAGATTCACA TTTAGCTGAC 
CAAATAATTC CATTTATGCC ATTTTCAGAT ATTAAAATAG GTGTTTCGAA AATTACAAAC 
CATACTCTAA CAAATATTTA CGTGGTTGAA AAATTCTTTG ACGTTAAGTT TAATATCGAA 
GAATACTCGA AAGATAATGC AAAAGGATAC GTGATATCGA CTAAAGGTGT TTAA
 
Protein sequence
MITIDGSYLE GGGQIVRTAI SLSAITKKPV KIINIRKNRK NPGLSNQHIA CVEAVSKICN 
ANVEGLLKGS ETLIFYPEDI TAKNFEIDIK TAGSISLVIQ SILPMCLAIN KNIEITLIGG 
TNVEFSPPID YIKKITLKFL ENIGINSEIN IIERGFFPEG GGIVKISLKP SKIVPLELIE 
NKNIEIKGVV FNQDLDENIS KRIRKSASDI LLNKGFCPEI KLENREGKST GVGIFLFNKY 
IGSDCLGKKG LLSETVGKIA SEDLLEELGT KMAIDSHLAD QIIPFMPFSD IKIGVSKITN 
HTLTNIYVVE KFFDVKFNIE EYSKDNAKGY VISTKGV