| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0949 |
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| Symbol | |
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| ID | 4928234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 923180 |
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| End bp | 924007 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640166447 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001097470 |
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| Protein GI | 134045984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.427827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATGATA AATCGAGAGA GCTTGTCGAA AGATATTTGA AATTCTGTTC GGGTCTGAGT
GAAACTACCC TTGTAAATTA TAAATCTACT ATGAAAATCT TCCTAAATTA CTATGACGAT
AGTCTTTCAT TTGAAAATTT AACAATAGAA GACATAATTG AATTTTTTGA GGTGTATGAA
GCTTCGAGAA ATACAAAAAT ATACCGTATA AGGTCTCTAA ATAGATTTTA TGAATGGGCT
AATAAACATA AATATATTAC GGGCAATCCA GTTAGAAGTT TTTTAAATAC TCTGAAACCC
GATAAAAAGG AAAGGGATTA TTTGACTCAA AAACAGTCAG ATGACCTTCT TAGAAGTATA
ATTGATGTTA ATTTCTATAT TTTTACCATG TTTTTTATTA AAACAGGGGT GAGGGTTTCA
GAATTTCAGA ATATACTACT TGATGATGTA GATTTTAACG AGCAAACAAT TTTTATACGT
GGTGGAAAGG GTAGAAAAGA TAGATTTGTG TTTTTTGACT TAGATATGGG AATTAATCTA
AAAAGATGGC TTCGAGAAAG GGATATTTTA AAACCAAAAG CACCGAATTT GTTTTTAAAT
CGGCGTGGTA AGGCAATCGG GAAGTCATCT ATAACGCATT ATATCAATTA TTTGAATGAC
GTTTATGGAA AAAAGGTTAA TAAACGGATT ACTCCGCATA TATTGAGACA TACCTTTGCA
ACAACTTGCG TGGATAAAGG AATGGATTTA AGAACACTTC AAGACATTTT AGGTCACGAA
GACATTAAAA CAACTTCGAT TTTCTTCATA AGAATAAAGA GAGTTTAA
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| Protein sequence | MNDKSRELVE RYLKFCSGLS ETTLVNYKST MKIFLNYYDD SLSFENLTIE DIIEFFEVYE
ASRNTKIYRI RSLNRFYEWA NKHKYITGNP VRSFLNTLKP DKKERDYLTQ KQSDDLLRSI
IDVNFYIFTM FFIKTGVRVS EFQNILLDDV DFNEQTIFIR GGKGRKDRFV FFDLDMGINL
KRWLRERDIL KPKAPNLFLN RRGKAIGKSS ITHYINYLND VYGKKVNKRI TPHILRHTFA
TTCVDKGMDL RTLQDILGHE DIKTTSIFFI RIKRV
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