| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0879 |
|---|
| Symbol | leuS |
|---|
| ID | 4929284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 857332 |
|---|
| End bp | 860199 |
|---|
| Gene Length | 2868 bp |
|---|
| Protein Length | 955 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640166379 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_001097402 |
|---|
| Protein GI | 134045916 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00395] leucyl-tRNA synthetase, archaeal and cytosolic family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.200306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAAA ATGGAGTAAA CGAGGGAACA GGACATAAAT CTGTTGATTT AATTCAAATA
ATGGATAAAT GGCAGAAAAA ATGGACGGAA GCTAAAATTT TTGAAGCTGA ACACGATTTA
AGGGACAAAT TTTTCATAAC TGCTGCATTT CCATACCTTA ATGGGGTACT TCATGCAGGA
CACTTAAGAA CATTTACAAT TCCAGAAACA ATTGCAAGAT ACCAGAGGAT GAAAAATAAA
AACGTGCTCT GGACCTTTGG ATTCCACGTT ACAGGAACTC CAATTTTGGG ACTTGCAAAC
CAGATCAAAG ATAGAAAAGA AGATATTATC TGGGCTTACA ACAATTTACA CAACATTCCA
ATGGACGAAC TCTTAAAATT GAAAACTCCT GAGGCAATAG TTGAATGCTT TTCAAAAAAA
GCAACAGAAG CCTTTAAAAG AATGGGATTT TCACTCGACT GGAGAAGAAA CTTTAAAACT
GACGATAAAG TTTTCAGTAA ATTCATAGAA TGGCAGTTTT ATAAATTAAA AGAAATGGGG
CACATTACAA AAGGATCACA CCCTGTAAGG TACTGCCCTA AATGTGAAAA CCCTGTAGAA
GACCACGATT TACTCCACGG TGAAGAATCA ACAACTGTAG AATACAGCTT AATCAAATTT
ACTTCTGAAT TTGACGGAAA AGAAATAATA ATGCCAATGG CAACTTTAAG GCCTGAAACA
CTTTTTGGTG TAACTAATGC TTGGGTTAAT CCAAATGAAA TTTATGTAAT GGCTAAAGTA
CACGATGAAA TCCAAAAATT AGATGGTGAA GACGTTGAGT TAAAATACAA CGGAATCTGG
ATTGTTGGAA AAGAATGTGC AGATAAATTA AAAGAACAAG ATAGAAAAAT TGAAATTTTA
AAAGAAATCA AAGGAAACGA ATTACTTGGT TTAAAAATCA AAAATCCTGT TACTAAAAAA
GAAGTTCCTC TTCTACCAGC AGATTTTGTT GAAATGGGAA TTGGAACGGG ATGGGTAATG
AGTGTTCCAG CACACGCTCC ATACGACTAC GTTGCTTTAA GGGATCTTGG AAAAATCGAA
GAAGTGGGCC TTATTCCATT GATCGAAATT GAAGGATACG ATAAATACCC TGCAAAAGAA
ATTGTGGAAA AATTGGGAGT TAAAGACCAA AATGATGATG AATTACTCGA GCAAGCAACG
AGTAAAATCT ATAAGGACGA ATTCCACAAG GGAAAATTAA ATGAAAACTG CGGAGAATAC
GCAGGAATCT CTGTAAAAGA CATTAAAGAA AAATTAACAA AAGATTACCT AAATTCAAAC
ATTGCAGAAA TAATGTACGA ATTTTCAGAG CAGAAAGTTG TTTGCAGGTG CGGTGAAAAG
TGTATTATAA AAACCGTGAA AGGACAGTGG TTTATTAACT ATTCTGACGA AAACTGGAAG
AAACTTGCAC ACGAATGTAT TGACAATATG AACTTTGCAC CTGAAAACAT AAGGCAGGAA
TTCCACAACA AAGTCGATTG GATGAAGGAT AAAGCCTGTG CAAGGAAAAA AGGGCTTGGA
ACAATACTGC CGTTTGACGA AAACTGGATT ATCGAATCAC TGTCTGATAG TACAATTTAC
ATGGCATATT ACACGATTGC AAGATTTATA AATGAGGGAT TAACTCCCGA ACAGCTTATT
CCAGAATTAT TCGAGTATGT ATATCTTGGA AATGGAAATG TTGAAGAAAT AACTAAAAAT
TCAAATATTT CAAAAGAAAC GATTGAAGAA ATGAGAAAAG AGTTCTTATA TTACTATCCG
CTTGACTGGA GATGTTCTGC AAAAGATTTA ATTCCAAATC ACCTCACATT CATGATATTC
AACCACGTTG CACTATTTGG AAGAGAACAC TGGCCAAGAG GAATTGAAAT AAACGGATAT
GTTACAATTG AGGGTAAAAA ACTTTCAAAA TCAAAAGGTC CGGTTTTACC AGTTTCAGAA
GTTGCAGAAA ACTTTGGTGC AGACGTTGCA AGGTTTTACA TCACAACATG TGCTGAACTT
CCGCAAGATG CAGACGTTAA ATTCAAAGAA ATGGAAAAAG CAAGAGATAA TTTAATAAAA
TTGTATGAAC TTGCAGTATC CGTCATGGAA GAAGAAAAAA CTGAAAAAGA ATTATCTTTA
ATTGATAAAT GGCTTTTACA CAAAACCTAT AGTTCAATAA ATGGTGCTGA AACTGCATAC
GAAGAATTCC AGCTTAGAAA AATTGGTTTG ATGTTTTATG AACTCATTAA CGATTTAAGA
TGGTACAAAA GAAGGGGCGG AGAAAATAAC AACGTTTTAA AAGAAGTTGT TGAAATCTGG
ACGAAATTAC TCTCTCCAGT AACCCCTCAC CTCTGTGAAG AAATCTGGGA AAAATTAGGA
TATGCTGGAT TTATTTCACA AGAACTGTAT CCTGAAATTA AATTAGAAAT GGTTAATGAA
GATTTAGAAC TTGGAGAAGA ATTTATCAAA TCTGCAATGG AAGATATCAG AAATATTAAC
GGAGTTGCAA AAATCAACCC TGAAAAAATG TATTTATACA CTGCAGACGA CTGGAAATAC
GATCTCCTTG AATTTATGAA CGAAAACTCT GAAAAAAACG TAAAAGCACT TATTCCAATG
GTCATGAAAG AAGATAAATT TAAAAGACAC GGAAAAGAAG TGATGAAATT AATCAATGAA
ATAATGAAAA TAGGTGTCAA AAAGGCAATA GCTGAAGTAG AAATACTAGA AAATGCCAAA
ACATTTATTG AAAGTGAATT CGATTGCGAG GTTATTGTAA ATGGTGAGGA TGTCAAAGGC
AAAAAGAAAT TTGCAATACC TTACAAACCT GCAATATATA TGGAATAA
|
|---|
| Protein sequence | MDQNGVNEGT GHKSVDLIQI MDKWQKKWTE AKIFEAEHDL RDKFFITAAF PYLNGVLHAG
HLRTFTIPET IARYQRMKNK NVLWTFGFHV TGTPILGLAN QIKDRKEDII WAYNNLHNIP
MDELLKLKTP EAIVECFSKK ATEAFKRMGF SLDWRRNFKT DDKVFSKFIE WQFYKLKEMG
HITKGSHPVR YCPKCENPVE DHDLLHGEES TTVEYSLIKF TSEFDGKEII MPMATLRPET
LFGVTNAWVN PNEIYVMAKV HDEIQKLDGE DVELKYNGIW IVGKECADKL KEQDRKIEIL
KEIKGNELLG LKIKNPVTKK EVPLLPADFV EMGIGTGWVM SVPAHAPYDY VALRDLGKIE
EVGLIPLIEI EGYDKYPAKE IVEKLGVKDQ NDDELLEQAT SKIYKDEFHK GKLNENCGEY
AGISVKDIKE KLTKDYLNSN IAEIMYEFSE QKVVCRCGEK CIIKTVKGQW FINYSDENWK
KLAHECIDNM NFAPENIRQE FHNKVDWMKD KACARKKGLG TILPFDENWI IESLSDSTIY
MAYYTIARFI NEGLTPEQLI PELFEYVYLG NGNVEEITKN SNISKETIEE MRKEFLYYYP
LDWRCSAKDL IPNHLTFMIF NHVALFGREH WPRGIEINGY VTIEGKKLSK SKGPVLPVSE
VAENFGADVA RFYITTCAEL PQDADVKFKE MEKARDNLIK LYELAVSVME EEKTEKELSL
IDKWLLHKTY SSINGAETAY EEFQLRKIGL MFYELINDLR WYKRRGGENN NVLKEVVEIW
TKLLSPVTPH LCEEIWEKLG YAGFISQELY PEIKLEMVNE DLELGEEFIK SAMEDIRNIN
GVAKINPEKM YLYTADDWKY DLLEFMNENS EKNVKALIPM VMKEDKFKRH GKEVMKLINE
IMKIGVKKAI AEVEILENAK TFIESEFDCE VIVNGEDVKG KKKFAIPYKP AIYME
|
|---|
| |