Gene MmarC5_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0856 
Symbol 
ID4928479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp834000 
End bp834557 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content29% 
IMG OID640166355 
Producthypothetical protein 
Protein accessionYP_001097379 
Protein GI134045893 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0332597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAT CAAATAAACT TAAGAAAAAA TATGGAATTA AAGATATTAG TGAACAGGGT 
TTTTTTGAAC ATTTTTTTGA ACTCGCACTC TGGAATTCCA GATTTGTCGT AGTTTTAGCA
GTTATTTTTG GAACTCTTGG ATCAATCATG TTATTCTTAG CAGGATCTGC TGAAATATTT
CATACAATCA TAACGTATAT TTCAGACCCG TTGAGTAGTG AACAACACAA TCAAATTTTA
ATCGGGGTTA TCGGTGCTGT TGACCTTTAT TTAATTGGAG TTGTACTTTT AATATTTAGT
TTCGGGATAT ACGAATTATT TATCTCAAAA ATTGATATTG CAAGAGTAGA TGATGATGTT
TCAAACATAC TAGAAATATA TTCTCTAGAT GAATTAAAAA GTAAAATCAT AAAAGTTATA
ATAATGGTTT TAGTAGTCAG CTTTTTCCAG AGAGTTCTCT CAATGCACTT TGAAACATCG
TTAGATATGA TATATATGGC AATATCCATA TTTGCAATAT CACTTGGAGT TTATTTCATG
CACAAACAAA AAGTGTAA
 
Protein sequence
MGKSNKLKKK YGIKDISEQG FFEHFFELAL WNSRFVVVLA VIFGTLGSIM LFLAGSAEIF 
HTIITYISDP LSSEQHNQIL IGVIGAVDLY LIGVVLLIFS FGIYELFISK IDIARVDDDV
SNILEIYSLD ELKSKIIKVI IMVLVVSFFQ RVLSMHFETS LDMIYMAISI FAISLGVYFM
HKQKV