Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0856 |
Symbol | |
ID | 4928479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 834000 |
End bp | 834557 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640166355 |
Product | hypothetical protein |
Protein accession | YP_001097379 |
Protein GI | 134045893 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0332597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAAAAT CAAATAAACT TAAGAAAAAA TATGGAATTA AAGATATTAG TGAACAGGGT TTTTTTGAAC ATTTTTTTGA ACTCGCACTC TGGAATTCCA GATTTGTCGT AGTTTTAGCA GTTATTTTTG GAACTCTTGG ATCAATCATG TTATTCTTAG CAGGATCTGC TGAAATATTT CATACAATCA TAACGTATAT TTCAGACCCG TTGAGTAGTG AACAACACAA TCAAATTTTA ATCGGGGTTA TCGGTGCTGT TGACCTTTAT TTAATTGGAG TTGTACTTTT AATATTTAGT TTCGGGATAT ACGAATTATT TATCTCAAAA ATTGATATTG CAAGAGTAGA TGATGATGTT TCAAACATAC TAGAAATATA TTCTCTAGAT GAATTAAAAA GTAAAATCAT AAAAGTTATA ATAATGGTTT TAGTAGTCAG CTTTTTCCAG AGAGTTCTCT CAATGCACTT TGAAACATCG TTAGATATGA TATATATGGC AATATCCATA TTTGCAATAT CACTTGGAGT TTATTTCATG CACAAACAAA AAGTGTAA
|
Protein sequence | MGKSNKLKKK YGIKDISEQG FFEHFFELAL WNSRFVVVLA VIFGTLGSIM LFLAGSAEIF HTIITYISDP LSSEQHNQIL IGVIGAVDLY LIGVVLLIFS FGIYELFISK IDIARVDDDV SNILEIYSLD ELKSKIIKVI IMVLVVSFFQ RVLSMHFETS LDMIYMAISI FAISLGVYFM HKQKV
|
| |