Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0840 |
Symbol | |
ID | 4928465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 814483 |
End bp | 815142 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640166340 |
Product | cobalamin B12-binding domain-containing protein |
Protein accession | YP_001097364 |
Protein GI | 134045878 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAT TAAAAGAACG ACTAATAAAA GAACTTTCCG ACTCTATTGT CGAAATGGAC GAAGAAAAAA CAGAAGAACT ATCTAAAAAG TATATTGAAA ATGGATTTGA TGCATTTGAA GGAATTACGG AAGGTCTCGC GGAAGGGATG AATAGGGCAG GAATACTTTA TGAAGAAGGA GAATACTTCA TTCCTGAACT TTTAGTCTGT TCTGACGCAA TGTACCTTGG TTTAGATATA TTAAAACCTC ATTTGAAGTA TACTGATTCA GATAGCAAAT TTAAAGCAGT TGTTGGTGTT GTTGAAGGAG ATACTCACGA TATTGGGAAA AACTTATTTA AAATTATGCT CGAAACACAA GGCTTTGAAG TTTATGATCT GGGTAGGGAT GTTCCACCTG TCGAATTCAT AAAAAAAGCT AAAGAAATCA ATGCAGACGT ATTGGGACTT TCAACGCTCA TGACGACTAC AATGGACAAT ATGAAAGTCG TTATTGACAT GTTGAAAGAA GAAGGAATGC GGGAAAAAAC AATTGTAATG ATTGGAGGAG GTCCAATCTC ACAAAGTTTC GCAGATAAAA TCGGTGCAGA CGGCTATGCA CCGGAAGCCT CAAAATCTGC AAGGATTGCA AAAGAATTAG TTACAAAATT AAAAAATTAA
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Protein sequence | MSELKERLIK ELSDSIVEMD EEKTEELSKK YIENGFDAFE GITEGLAEGM NRAGILYEEG EYFIPELLVC SDAMYLGLDI LKPHLKYTDS DSKFKAVVGV VEGDTHDIGK NLFKIMLETQ GFEVYDLGRD VPPVEFIKKA KEINADVLGL STLMTTTMDN MKVVIDMLKE EGMREKTIVM IGGGPISQSF ADKIGADGYA PEASKSARIA KELVTKLKN
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