Gene MmarC5_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0839 
Symbol 
ID4928464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp813367 
End bp814458 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content37% 
IMG OID640166339 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_001097363 
Protein GI134045877 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01463] methyltransferase, MtaA/CmuA family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACC CAGACAAAAT GACACCCGTT GAAAGAGCTA CTGCTAAGGC AAAAGGGGAG 
CCAATCGATA GAATTGCATG TAACCCAAAT ATTGGAAACG GAATGGCAAG AATTGCAGGC
TATAAAATTT CACAATTTAA CACGGATCCA GAAGCATTAG CGGATGCAAT TATCAAAACA
TACAGAAGAT TTGGATCAGA CGGTGCAAGA GTCTTCACAG ATTTGTTTTT GATTTCAGAA
GCAATGGGTG CAAAAATTAA CATGCCCTAT GACAATACTG CAGATTTGGA AGAACCTGCA
ATAAATAACA TGTCAGAATT TGATAAATTA AAAGTCATTG ATCCATACAC GGATGGTAGA
ATACCCGTTC ATTTAAGGGC ACTTGAAATT GTACGAGATG AAATAGCAAG TGACGTTGGA
GTTACTGCTT CAGTTGTTGG TCCATTTACA AACGCTTTCT TTTTAATTGG CGTAGAAAAA
ATGACAAAAA TGCTTTTAAA AGACCCAGAC TCAGTTCACA AACTATGTGA AATTTCACTC
CAAAGCTGCA TTGCATTAAC CGATGCAGTT CTCGAAAAAG GGACGGGAGT TACAGTTTCA
GAACCACTTT CTTCATGTAC TGTTGTAAGT CCAAAACATT TCAGAGAATT TTCAGCACCT
TATTTAAAAC GATTAATAGA CTATATAAAA GCAAGAACTG GAAAATTGGT CATTCATATC
TGTGGAAAGA CTGATCCTAT CTGGGAAGAT CTTGTGGATA TGGGTGTTGA TGTTTTAAGT
ATTGATGATA TTGCAGATCT GGAAAACTGT GCAGAAACCG TTGGTGACAG AATGGTTATT
GCAGGAAATG TCGACCCTTC AGGAGTATTG TATGCTGGTT CAAGAGAAGA TGTTAGAAAA
GCTACCTTAA AATGTATTAA ACAGGGAATT AATGCTAAAA AAGGATACAT GATAATGTCT
GGATGTAGTC TTCCTGTAGA TGTTCCTGTT GAAAATATTG ATGCAATGAT GGATGCTGCA
AGGGAAGCCG GATGGCCAAT TACCGAAGAA AAATTAGATT ATTTACTTAG TATTGATAAA
TACAATGACT AA
 
Protein sequence
MDYPDKMTPV ERATAKAKGE PIDRIACNPN IGNGMARIAG YKISQFNTDP EALADAIIKT 
YRRFGSDGAR VFTDLFLISE AMGAKINMPY DNTADLEEPA INNMSEFDKL KVIDPYTDGR
IPVHLRALEI VRDEIASDVG VTASVVGPFT NAFFLIGVEK MTKMLLKDPD SVHKLCEISL
QSCIALTDAV LEKGTGVTVS EPLSSCTVVS PKHFREFSAP YLKRLIDYIK ARTGKLVIHI
CGKTDPIWED LVDMGVDVLS IDDIADLENC AETVGDRMVI AGNVDPSGVL YAGSREDVRK
ATLKCIKQGI NAKKGYMIMS GCSLPVDVPV ENIDAMMDAA REAGWPITEE KLDYLLSIDK
YND