Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0839 |
Symbol | |
ID | 4928464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 813367 |
End bp | 814458 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640166339 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001097363 |
Protein GI | 134045877 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTACC CAGACAAAAT GACACCCGTT GAAAGAGCTA CTGCTAAGGC AAAAGGGGAG CCAATCGATA GAATTGCATG TAACCCAAAT ATTGGAAACG GAATGGCAAG AATTGCAGGC TATAAAATTT CACAATTTAA CACGGATCCA GAAGCATTAG CGGATGCAAT TATCAAAACA TACAGAAGAT TTGGATCAGA CGGTGCAAGA GTCTTCACAG ATTTGTTTTT GATTTCAGAA GCAATGGGTG CAAAAATTAA CATGCCCTAT GACAATACTG CAGATTTGGA AGAACCTGCA ATAAATAACA TGTCAGAATT TGATAAATTA AAAGTCATTG ATCCATACAC GGATGGTAGA ATACCCGTTC ATTTAAGGGC ACTTGAAATT GTACGAGATG AAATAGCAAG TGACGTTGGA GTTACTGCTT CAGTTGTTGG TCCATTTACA AACGCTTTCT TTTTAATTGG CGTAGAAAAA ATGACAAAAA TGCTTTTAAA AGACCCAGAC TCAGTTCACA AACTATGTGA AATTTCACTC CAAAGCTGCA TTGCATTAAC CGATGCAGTT CTCGAAAAAG GGACGGGAGT TACAGTTTCA GAACCACTTT CTTCATGTAC TGTTGTAAGT CCAAAACATT TCAGAGAATT TTCAGCACCT TATTTAAAAC GATTAATAGA CTATATAAAA GCAAGAACTG GAAAATTGGT CATTCATATC TGTGGAAAGA CTGATCCTAT CTGGGAAGAT CTTGTGGATA TGGGTGTTGA TGTTTTAAGT ATTGATGATA TTGCAGATCT GGAAAACTGT GCAGAAACCG TTGGTGACAG AATGGTTATT GCAGGAAATG TCGACCCTTC AGGAGTATTG TATGCTGGTT CAAGAGAAGA TGTTAGAAAA GCTACCTTAA AATGTATTAA ACAGGGAATT AATGCTAAAA AAGGATACAT GATAATGTCT GGATGTAGTC TTCCTGTAGA TGTTCCTGTT GAAAATATTG ATGCAATGAT GGATGCTGCA AGGGAAGCCG GATGGCCAAT TACCGAAGAA AAATTAGATT ATTTACTTAG TATTGATAAA TACAATGACT AA
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Protein sequence | MDYPDKMTPV ERATAKAKGE PIDRIACNPN IGNGMARIAG YKISQFNTDP EALADAIIKT YRRFGSDGAR VFTDLFLISE AMGAKINMPY DNTADLEEPA INNMSEFDKL KVIDPYTDGR IPVHLRALEI VRDEIASDVG VTASVVGPFT NAFFLIGVEK MTKMLLKDPD SVHKLCEISL QSCIALTDAV LEKGTGVTVS EPLSSCTVVS PKHFREFSAP YLKRLIDYIK ARTGKLVIHI CGKTDPIWED LVDMGVDVLS IDDIADLENC AETVGDRMVI AGNVDPSGVL YAGSREDVRK ATLKCIKQGI NAKKGYMIMS GCSLPVDVPV ENIDAMMDAA REAGWPITEE KLDYLLSIDK YND
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