| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0819 |
|---|
| Symbol | |
|---|
| ID | 4928554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 786113 |
|---|
| End bp | 787069 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640166320 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001097344 |
|---|
| Protein GI | 134045858 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.350869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGTT GGTTAGATTA TGGTGCGAGA TACGTTGTAG AAAATATCCT AAATTTGAGT
ATGGAAACTG CAATTGCCTC ATCAGTTCAC TTTTTCATAT ACGACAGCTT AAAAATTGTA
ATTTTGCTTT CTATAATGAT ATTTTCAATT TCATACATTA GAAGCTATTT TCCACCCGAA
AAAACAAAAA AAATACTCGA AAAGTATTCC GGAGTTTCTG GAAACATTAT GGCATCATTA
CTTGGAATTG TAACACCATT TTGTTCATGC TCCTCAGTTC CACTATTTAT TGGATTCGTG
GAAGCGGGAA TCCCTCTTGG AGTTACCCTT TCGTTTTTGA TCACCTCTCC GATAGTAAAC
GAAGCAGCTT TTGCAGTACT TTTGGCATCT TTTGGATGGA AAATAGCAAT GCTCTACGTA
ATTTCCGGAG TAATTATCGG GGTGATTGGC GGAATTATAA TTGGTAAACT TAAAATGGAA
GATCAGGTCG AAGAATACGT ATATGAAATA AGAAGCAGGG CTCGAAAAAT AAAGAAATTA
ACTCAAAAAA AGCGTTTAAA ATTTGCAAAG GACAATACAA AAGATATTGT AATGAGAGTC
TGGCTTTACA TCTTGATTGG TATTGGAATT GGAGCAATAA TACACGGTTA TGCGCCAGAA
GCGATTCTTG CAAAATATGC GGGTCCAGAT AATCCTTTAG CAGTAATTTT TGCAACAATT
ATTGCAGTAC CTCTTTATTC AAATGCGCTT GGAACAATCC CTATTGCAGA AGCGTTAATT
GGAAAAGGAG TAGGAATTGG AACTGCGCTT GCATTTATGA TGGCAACAAC TGCGTTATCC
TTCCCAGAAG CAGTTTTACT TAGAAAAGTA ATAAAACCAA AATTAATAGC TGCATTCTTT
GGAATTACGA GCATTGCAAT TGTAATTACA GGATATTTAT TCAATATCCT CCTTTAA
|
|---|
| Protein sequence | MFGWLDYGAR YVVENILNLS METAIASSVH FFIYDSLKIV ILLSIMIFSI SYIRSYFPPE
KTKKILEKYS GVSGNIMASL LGIVTPFCSC SSVPLFIGFV EAGIPLGVTL SFLITSPIVN
EAAFAVLLAS FGWKIAMLYV ISGVIIGVIG GIIIGKLKME DQVEEYVYEI RSRARKIKKL
TQKKRLKFAK DNTKDIVMRV WLYILIGIGI GAIIHGYAPE AILAKYAGPD NPLAVIFATI
IAVPLYSNAL GTIPIAEALI GKGVGIGTAL AFMMATTALS FPEAVLLRKV IKPKLIAAFF
GITSIAIVIT GYLFNILL
|
|---|
| |