| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0768 |
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| Symbol | |
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| ID | 4929327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 734558 |
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| End bp | 737020 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640166269 |
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| Product | CRISPR-associated helicase Cas3 family protein protein |
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| Protein accession | YP_001097293 |
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| Protein GI | 134045807 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATT TAATAATGTC TCACGAAAAA AAGTTATTAA AAGACCATCT TTTTAATGTG
GGAAAGAATA TAGAGAATAT TTTAGTTAAA AAAGATTTGG ATCTTAAATT AATAGATAAG
GAATTATTGC CGAAGTTAGG GTATTTGATA GGTATAGCCC ATGATTTTGG AAAATCCACT
AGTTTTTTTC AGAGTAAATT AAATGAAAAT AAAAATTCAG AATATTCACA TCATGGTCTA
ATTTCATCTA TTTTCGGTTA CCACCTGTTA AAAGAATATG TCCATAATGA AGATTTTTCA
ATAATTTCAT ACATTGCTAT AAAAAATCAT CACGGGAACA TAAAATGTCC ACTGGAAAGT
ATATCTTCAA GGTTAGAAAA AGATCTCAAA GTGCAGTACA AAGATATTCT TTCCAGAAAA
GAAGAAGTGT TTAAAATTTA TGAAACATTG CTTTTGGAAT ATCAAATAGA TCTCGAAAAA
GTTTTTTTGA ATATGGAAAT AACCATTGAA GATTTTGAAT CATTTATTGA TGATATGGAA
GATATGTTGG ATGAAGAGTT AGAATCAAGT GATGCGATAG AACGTTTTTT AACGTGCAAT
TTATTATACT CTGTTCTGGT AGATTCTGAT AAAAAAGAAG CTGCTAATTT ATCCAATGAA
TATTTTACAG ACAATGTGGA ATCATATTAT GATATCAAAG AATATATTAA TAATTTGAAA
CAGGAAATGG CTGAAAAATT TGTAAAGAAT AATATGAATT TATTAAGGGA TCAGTTTTAT
CAGGATGTAG TTGAAAATCC AATGATTTCT AATAAATGTT ATATGTATTC AGTAAATGCG
CCAACAGGTA TCGGAAAAAC ACTAACAGTT TTGGGCCTAG CAAATAAGAT TAAATCGTTA
AACCCTAAAA GTAACCGAAT AATATATTGT CTTCCATATA GCAGTATAAT TGACCAGACA
CATGGGGAAA TGGAAAATAT ATTTAAGTAC TTTATTGGGG AAGAATATTC CAAAAAACCA
ACTAAATATT TACTAAAACA CCATTATTTA ACTCCATTAC TTATTAAAGG ACTAGATAAT
GAAGAAGATT GCAATTTAAC GCAGGACAGC GATATAAACA TTACATATAT GGACCAAAAA
TTATTATTGG AATCATGGGA AAGCGCAAAT ATTATCACAA CATTTGTTCA ATTTTTCGAG
AGTATATTTA GTAATAAAAA TTCAAGACTT AAAAAATTTC ATAATATTAT CAATTCGATA
GTTATTTTGG ATGAAATTCA GACAATGCCC GCAGAATATT ATAAATTAAT AAAAATGGTA
TTTGAAATAC TTTCAAAACG ATTTAAAACG ACCATTATTT TTTTAACTGC AACACAACCA
AATTTGGCAT GCGAAGATTC AGTAAATCTT GTAAATACTC GTTATTTTAC CAATAATGAA
TTTGATCGTG TAGAACTGTA CAAAATAAAC GGATTAACTC CAATTGACGA AAAACAGTTT
TTAGACTCTT TTGAAAAACT ATTTTTTGGG AATTCTGCAA TTGTGGTATG TAACAAAATA
AATGTGGCAA TTAAACTTTA TGAATTAATA CGAAAAAATG AAAAATTTTC AGAATATTCA
GTATTATCCT TAACTACCAA TATAACTCCA AAGGATAGGA AAAATCGCAT AAAAAAAATA
AACAAAATGT TAAAAGGTAA TGAAAAAATT ATTTTAGTTT CGACCCAACT AATTGAAGCA
GGCGTAGATT TAAGTTTTCA ATATGGATTT AGGGATGTTG CACCATTGGA TTCAATAATT
CAAACATCCG GACGGGTAAA CAGAAGCAAT GAATACGATA TTGGAAAGAT GTATTTATTT
AATTACGTTG GTGAAAATGG GAGAATCGGA TCTAGTATAT ATGATCCCAA ATCAATACAG
ATAACCCGGG AATTACTTGA AAATGATAAA TATATGAGTA AAGATTATTG GGGGCTGTCT
AATCAGTATT ATGGAAAATA TATGCTATCT GGAAAAAGCA ATCTTCTATT AAATAGTATT
TATAATTTAA TTTATGAAAT GAAAGAATAT AATAAAAATA AAATATTGCC TGTAAATATG
TTCAAGGTTA TAACTGACCA TAAAAAGTTT GATGTAATAA TATCACCAGA CGAAACTTCG
GATTTAAAAA TAAAAGAACT TATAAAAACC CATGAAGCAA TGATTCAGAT AACTGAAATA
TATGGGGAAA ATAAAATGGA ATTTGGTAAA TTAAGTGAAA AATATGAAAT TTTAAAGAAA
GAATTAAACG AAAATAGGGT TTCAATCTAT GAAAATATAT TAAATAAATA TTCTGACTTC
ACTCATGAAT TTAATGGTTT AAACTACATT CTCAGCGAAG ATTACAACAA AATATATGAT
GAAAACATTG GGGTCATAGC ATTAGATAAT TGTGAAATAA AACATAAAAC ATTGTTTAGT
TAG
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| Protein sequence | MQNLIMSHEK KLLKDHLFNV GKNIENILVK KDLDLKLIDK ELLPKLGYLI GIAHDFGKST
SFFQSKLNEN KNSEYSHHGL ISSIFGYHLL KEYVHNEDFS IISYIAIKNH HGNIKCPLES
ISSRLEKDLK VQYKDILSRK EEVFKIYETL LLEYQIDLEK VFLNMEITIE DFESFIDDME
DMLDEELESS DAIERFLTCN LLYSVLVDSD KKEAANLSNE YFTDNVESYY DIKEYINNLK
QEMAEKFVKN NMNLLRDQFY QDVVENPMIS NKCYMYSVNA PTGIGKTLTV LGLANKIKSL
NPKSNRIIYC LPYSSIIDQT HGEMENIFKY FIGEEYSKKP TKYLLKHHYL TPLLIKGLDN
EEDCNLTQDS DINITYMDQK LLLESWESAN IITTFVQFFE SIFSNKNSRL KKFHNIINSI
VILDEIQTMP AEYYKLIKMV FEILSKRFKT TIIFLTATQP NLACEDSVNL VNTRYFTNNE
FDRVELYKIN GLTPIDEKQF LDSFEKLFFG NSAIVVCNKI NVAIKLYELI RKNEKFSEYS
VLSLTTNITP KDRKNRIKKI NKMLKGNEKI ILVSTQLIEA GVDLSFQYGF RDVAPLDSII
QTSGRVNRSN EYDIGKMYLF NYVGENGRIG SSIYDPKSIQ ITRELLENDK YMSKDYWGLS
NQYYGKYMLS GKSNLLLNSI YNLIYEMKEY NKNKILPVNM FKVITDHKKF DVIISPDETS
DLKIKELIKT HEAMIQITEI YGENKMEFGK LSEKYEILKK ELNENRVSIY ENILNKYSDF
THEFNGLNYI LSEDYNKIYD ENIGVIALDN CEIKHKTLFS
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