| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0756 |
|---|
| Symbol | |
|---|
| ID | 4928081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 723871 |
|---|
| End bp | 725205 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640166257 |
|---|
| Product | tRNA CCA-pyrophosphorylase |
|---|
| Protein accession | YP_001097281 |
|---|
| Protein GI | 134045795 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
|---|
| TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.155952 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAT TAAATATTAA CGATTATAAC GATATTTTAA ACGAAGTTTT AAACGATATC
CGTCCAACAG AACTGGAAAA AGATAAATTA AAAGTATTTT CGGATAAAAT AATCGCTAAA
ATTAAAGATA TTTCAAAATA TCCTGTTTTA GACATCATTC AAGTCGGATC AACTGCAAGA
GATGCAAATT TAAAAGACGA TCATGACCTT GACATTTTTT TAAGATTTGA AAAGGAAACC
GATCGAGATA CGTTAAAAGA ATCTGGCTTA AGAATCGGAA AAGAAGTAAT TGATTATTTC
AATGGAAAAT CTTGGGTAGA ATACGCTGAA CACCCTTATG TTTCTGGAGA AATTGAAAAA
TTCAATCTAG ATATTGTTCC GTGCTACGGC ATTGAAAACT GCGAAAAAAT AATTTCCGCA
GTTGACCGGA CTCCTCTTCA TAACGAATTT TTGATAATGT CTTACAAAAA TAAAAATTTA
TCAGATGATA TCCGTCTTTT AAAAAAATTC TTAAAAGGTC TTGGAATTTA TGGTTCTGAC
TTAAAAACTG CTGGTTTTTC AGGATATCTG TGTGAACTTT TGATATTAAA ATACGGCGGA
TTTTTAAGCC TTTTGTCTGA CGTAAAAAAT TGGAGACCGA ATAAATCAAT AGTATTAAAC
GAAATTTACG AAATGTATGA TTTGAAAAAA GAACATGAAT TTTTAAATTT TGACGATTCC
TTAGTCGTAT ATGATCCGGT TGATTTAAAC AGAAACGTTG CAGCAGCGTT AAATGAAGAA
AACCTCTGCA AATTTATATT TTATTCAAAG ATGTTTTTAG AAAATCCTTC AAAAGAATTC
TTTTATGGAT TTGATAAAAA AATTACAGAT TTTTTAAATA TACGAGAACG AGGATATTTA
TTAACTTTAG AAATTTCAAG GCCCGAAAAT ATCGTTGAAG ATGTAATATA CCCGCAAATG
GAAAAAATAC AAAAAAGCAT CAATAAATTA ATTAAAGAAC ATGATTTTGA ATATATAAGA
TACCAAAATT TTGCAGATGA AAATACGTGT TATCTATCTT GGGAATTTTT AATTCATGAA
CTTCCAGATG TAAAAATAAG AACTGGCCCC CCAGTATACA GCGAACCGGG AGTAGTGAAT
TTTATAACGC ATAACGAACA TTATTTTGTT AAAGGCTGCA ATGTTTGCGC ATACAAAACC
AGAAAATATA AAAACATACA AATACTATTC GAAGATATTG TTAATGGGAA ATTGAGGAAG
ATTATAACAT ATCCTAAGTA CGTGTGCCCT GAAAATGCGG AAATACGATT AGGTACTTTT
GTCGAGAGGA CATAA
|
|---|
| Protein sequence | MKKLNINDYN DILNEVLNDI RPTELEKDKL KVFSDKIIAK IKDISKYPVL DIIQVGSTAR
DANLKDDHDL DIFLRFEKET DRDTLKESGL RIGKEVIDYF NGKSWVEYAE HPYVSGEIEK
FNLDIVPCYG IENCEKIISA VDRTPLHNEF LIMSYKNKNL SDDIRLLKKF LKGLGIYGSD
LKTAGFSGYL CELLILKYGG FLSLLSDVKN WRPNKSIVLN EIYEMYDLKK EHEFLNFDDS
LVVYDPVDLN RNVAAALNEE NLCKFIFYSK MFLENPSKEF FYGFDKKITD FLNIRERGYL
LTLEISRPEN IVEDVIYPQM EKIQKSINKL IKEHDFEYIR YQNFADENTC YLSWEFLIHE
LPDVKIRTGP PVYSEPGVVN FITHNEHYFV KGCNVCAYKT RKYKNIQILF EDIVNGKLRK
IITYPKYVCP ENAEIRLGTF VERT
|
|---|
| |