Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0743 |
Symbol | aroE |
ID | 4928124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 711417 |
End bp | 712259 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640166244 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001097268 |
Protein GI | 134045782 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.738673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATAG ATTCAAAAAC AAAACTACTC GGACTTATTG GACATCCTGT AGATCATTCA TTTTCACCGA TAATGCACAA TGCTGCAATT GAAGACCTTG GAATAAATTA TAGATACCTT GCATTTGATG TTTCAGAAGA AAACCTAAAA GATGTGGTTG CAGGTGCAAA AGCATTTCAG ATTGCAGGTT TTAACATTAC AATCCCGCAT AAAATGAATA TTATGAAATA TCTGGATGAA ATTGATGACG ATGCAAAAGC AATTGGTGCA GTAAATACTG TAAAAATTGA AAATGGAAAA GCAATAGGGT ATAACACTGA CGGAATTGGT GCAAAGAAGG CACTTGAAGA AAAAACTGGA ATTTTAATTA ATAAAAACAT TTTAATCATA GGCTCAGGAG GCGGCTCAAG AGCTGTTTCT TATGAACTTG CAAAGGAAAA TAAACTAACA ATTATAAACA GAAATATTGA AAAAGCAAAA ATTCTTTCTG AAGAACTTTC TAAAAATTTG AAAAAGCAAA ATTCAATAAC CTACGGGGAT TTAAATGTAG ATATAAAAGA TTTTGACATT ATTATAAATA CAACACCTGT TGGAATGTAT CCAAACATGA ATGTAAAGCC AGTAATTCCT TTGAATGATA TAAAATATGG TGCGGTTGTA ATGGATTTAA TATATAATCC TCTTGAACCA GTATTTTTAA AAGAAGCCAT AAAATATGGT GCGGAAACAA TAAATGGTAT TGGAATGCTT GTATATCAAG GGGCTGTTTC TTTTGAAATA TGGGCTGGGA AAAAACCAGA TGTATACGTG ATGAAAAAAA GTATTAATTC AAACATTCGA TAG
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Protein sequence | MMIDSKTKLL GLIGHPVDHS FSPIMHNAAI EDLGINYRYL AFDVSEENLK DVVAGAKAFQ IAGFNITIPH KMNIMKYLDE IDDDAKAIGA VNTVKIENGK AIGYNTDGIG AKKALEEKTG ILINKNILII GSGGGSRAVS YELAKENKLT IINRNIEKAK ILSEELSKNL KKQNSITYGD LNVDIKDFDI IINTTPVGMY PNMNVKPVIP LNDIKYGAVV MDLIYNPLEP VFLKEAIKYG AETINGIGML VYQGAVSFEI WAGKKPDVYV MKKSINSNIR
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