Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0704 |
Symbol | |
ID | 4928972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 679869 |
End bp | 681140 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640166205 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001097229 |
Protein GI | 134045743 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.786824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA ACTTAAAAAA AGATGGAATT GTAAAAGACA GTGCATACAT GATATTTTCA AACATGTATT CCAAATTTGC AGCCTATCTT TTTTATTTTT TAATACCATT TATTCTTGGA ACTGAGGGTT TTGGTATCAT TAAAGGGTTA ATGCCGATTT TAGATACGTT AGTTATTATT TTTTGTTCGG GAATTCCGCC AGCAATGGCA AAATTTATTT CTGGCAATGA CCTTAAAGAA AATACTTGGA TATACGATAT TTTAAAAGTA ATGTTTATTT TTTCAATATT TGGCGGAATT TTTACAGTAT TTTTAAAATA TTTGCTTGGC GGAAACTATT CTAATTTACC AAATGTTTAT TTTTACGCTG TCGCACTTGC ATTACCATTT TCAGTAGTTA TTTCGTGGAG CAGGGGCGTA TTACAGGGAA ATTTAAAAAT AAAGAATTTA TCAAAAACAT GGATTTTAGA AAATACTTCA AAAGTTGTTT TTTTAGTAAT TTTGAGCTAT TTATTTGGCG TATTTGGTGG AATTCTATCG ATTTCAGTTT CATTTTTAAT CGGCGGAATT TTTGGAATCT ACCTCTTATC AAAATCAAAT CTAGAATATT CATTTTCACA TATTTTAAAA AATATATTTT CACCGATAAA AGAGAAGGAA TCTGTTAAAA AAGTTATATA TTATTCAATT CCTATCGCAC TTACGACTGC ATCCTATAGG CTTATAAATG ATCTCGATGG TATTTTCATA CTTTCGATGC TTGGAGCTTA TGATAATGGT GTTTACGGAT ACGCATCGTT ACTTTCAAGG CTTCTTTTCT TGTTCGCATC TGCAATAGCA ATAGTACTAA TTCCAAGAAT TTCAAAATCG AAAGACATTT CATATTTTAA AAAAGCAACA ATTTTGAACA TTTTAATAGT TTTACCTGCA TTATTAATAA TTTTTTTATT CTCAAAAGAA CTTTTGAAAC TGTTTTTTGG AATAAATACT CCTGAAAGCG TTACTTCTTT AAAAATACTC TCAGTATCTG CAGTTTTCAT GAGTACATAT ACAATATGTG CGTCATCCCT TCAGGGTCTT GGATACGCAA AAATTCCAGT ATATGTTTTA TTTTTAGGCA TTTTGTTAAA TGCAATATTA AATTACATGT TAATTCCAAA TTTGGGCATT ATTGGCGGTG CAATTGCAAC TCTTTCATCG TCATTTGCTG TATTTGTATT AATTTGGATA ATTACATTTA GTAAGCTTAA AAAAATTAAA AATAATAGTT AA
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Protein sequence | MIKNLKKDGI VKDSAYMIFS NMYSKFAAYL FYFLIPFILG TEGFGIIKGL MPILDTLVII FCSGIPPAMA KFISGNDLKE NTWIYDILKV MFIFSIFGGI FTVFLKYLLG GNYSNLPNVY FYAVALALPF SVVISWSRGV LQGNLKIKNL SKTWILENTS KVVFLVILSY LFGVFGGILS ISVSFLIGGI FGIYLLSKSN LEYSFSHILK NIFSPIKEKE SVKKVIYYSI PIALTTASYR LINDLDGIFI LSMLGAYDNG VYGYASLLSR LLFLFASAIA IVLIPRISKS KDISYFKKAT ILNILIVLPA LLIIFLFSKE LLKLFFGINT PESVTSLKIL SVSAVFMSTY TICASSLQGL GYAKIPVYVL FLGILLNAIL NYMLIPNLGI IGGAIATLSS SFAVFVLIWI ITFSKLKKIK NNS
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